Table 2.
donor genome | donor phylogroup | donor pathotype | recipient genome | recipient phylogroup | recipient pathotype | minimum number of genes transferred (edge weight) |
---|---|---|---|---|---|---|
E. coli E24377A | B1 | EPEC | E. coli IAI1 | B1 | commensal | 13 |
E. coli ED1a | B2 | healthy subject | E. coli CFT073 | B2 | ExPEC | 11 |
E. coli E24377A | B1 | EPEC | E. coli SE11 | B1 | commensal | 10 |
E. coli UMN026 | D | ExPEC | E. coli E2348 | B2 | EPEC | 9 |
E. coli SMS35 | D | environmental | E. coli 536 | B2 | ExPEC | 9 |
E. coli CFT073 | B2 | ExPEC | E. coli APEC+E. coli S88+E. coli UTI89 | B2 (ancestral) | — | 8 |
E. coli ED1a | B2 | healthy subject | E. coli 536 | B2 | ExPEC | 8 |
E. coli UMN026 | D | ExPEC | E. coli SMS35 | D | environmental | 8 |
E. coli UMN026 | D | ExPEC | E. coli IAI39 | D | ExPEC | 7 |
E. coli C ATCC+E. coli HS | A (ancestral) | — | E. coli 55989 | B1 | EPEC | 7 |
E. coli 536 | B2 | ExPEC | E. coli APEC+E. coli S88+E. coli UTI89 | B2 (ancestral) | — | 6 |
E. coli E2348 | B2 | EPEC | E. coli 536 | B2 | ExPEC | 6 |
E. coli E2348 | B2 | EPEC | E. coli CFT073 | B2 | ExPEC | 6 |
E. coli EDL933+E. coli O157 : H7 | E (ancestral) | — | S. boydii | S. boydii (ancestral) | — | 6 |
E. coli IAI1 | B1 | commensal | E. coli E24377A | B1 | EPEC | 6 |
E. coli SE11 | B1 | commensal | E. coli HS | A | commensal | 6 |
E. coli UMN026 | D | ExPEC | E. coli MG1655+E. coli W3110 | A (ancestral) | — | 5 |
E. coli EDL933+E. coli O157 : H7 | E (ancestral) | — | E. coli C ATCC | A | commensal | 5 |
E. coli UMN026 | D | ExPEC | E. coli 536 | B2 | ExPEC | 5 |
A | A (ancestral) | — | E. coli IAI39 | D | ExPEC | 5 |
A | A (ancestral) | — | S. boydii | S. boydii (ancestral) | — | 5 |
E. coli C ATCC+E. coli HS | A (ancestral) | — | S. boydii | S. boydii (ancestral) | — | 5 |
E. coli 536 | B2 | ExPEC | E. coli ED1a | B2 | healthy subject | 5 |
E. coli CFT073 | B2 | ExPEC | E. coli ED1a | B2 | healthy subject | 5 |
E. coli SE11 | B1 | commensal | A | A (ancestral) | — | 5 |