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. 2012 Jul 5;132(11):2552–2564. doi: 10.1038/jid.2012.184

Table 2a. The top 50 unique genes upregulated in lesional skin compared with non-lesional skin biopsy samples obtained at baseline from 85 patients with moderate-to-severe psoriasis (FDR P<0.05 and FCH >2).

        Mean expression in skin samples
 
Probe set ID Gene symbol Gene title Fold change (lesional vs. non-lesional) Non- lesional Lesional Cytokine regulation1
205863_at S100A12 S100 calcium–binding protein A12 889.1 2.72 12.52 IL-17, TNF-α, IFN-γ, A
211906_s_at SERPINB4 Serpin peptidase inhibitor, clade B (ovalbumin), member 4 740.44 3.76 13.30 IL-17, S
205513_at TCN1 Transcobalamin I (vitamin B12–binding protein, R binder family) 400.17 2.95 11.60  
232220_at S100A7A S100 calcium–binding protein A7A 287.22 5.15 13.32 S
220664_at SPRR2C Small proline-rich protein 2C (pseudogene) 243.3 3.62 11.55 IL-17, A
205660_at OASL 2′-5′-Oligoadenylate synthetase-like 238.28 3.15 11.04 IFN-γ
207602_at TMPRSS11D Transmembrane protease, serine 11D 199.6 2.89 10.53 S
1569555_at GDA Guanine deaminase 168.79 3.44 10.84  
210663_s_at KYNU Kynureninase (L-kynurenine hydrolase) 153.53 2.75 10.02 TNF-α, S
207367_at ATP12A ATPase, H+/K+ transporting, nongastric, α-polypeptide 148.59 3.93 11.15 A
220528_at VNN3 Vanin 3 144.45 2.23 9.40 S
210413_x_at SERPINB3/SERPINB4 Serpin peptidase inhibitor, clade B (ovalbumin), member 3/serpin peptidase inhibitor, clade B (ovalbumin), member 4 136.5 6.86 13.95  
206561_s_at AKR1B10 Aldo-keto reductase family 1, member B10 (aldose reductase) 114.33 6.19 13.03  
202859_x_at IL8 interleukin 8 105.05 2.82 9.54 IL-17, TNF-α, S
205783_at KLK13 Kallikrein-related peptidase 13 94.62 4.16 10.73  
219554_at RHCG Rh family, C glycoprotein 74.17 5.51 11.72 IL-17, TNF-α, A
204470_at CXCL1 Chemokine (C–X–C motif) ligand 1 (melanoma growth stimulating activity, alpha) 72.33 2.45 8.63 IL-17, TNF-α, IFN-γ, S
1554914_at PLA2G4D Phospholipase A2, group IVD (cytosolic) 66.91 2.75 8.81  
205476_at CCL20 Chemokine (C–C motif) ligand 20 64.89 2.93 8.95 IL-17, TNF-α, S
219403_s_at HPSE Heparanase 63.46 6.14 12.13  
216258_s_at SERPINB13 Serpin peptidase inhibitor, clade B (ovalbumin), member 13 61.38 3.25 9.19  
210164_at GZMB Granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 60.46 2.93 8.85  
232074_at PRSS27 Protease, serine 27 56.4 4.33 10.15  
204733_at KLK6 Kallikrein-related peptidase 6 51.71 6.79 12.48  
205844_at VNN1 Vanin 1 50.72 4.41 10.08  
210038_at PRKCQ Protein kinase C, theta 48.3 2.54 8.14  
206912_at FOXE1 Forkhead box E1 (thyroid transcription factor 2) 46.38 2.92 8.45 S
239430_at IGFL1 IGF-like family member 1 46.06 4.77 10.30  
220322_at IL1F9 Interleukin 1 family, member 9 45.99 7.82 13.34 IL-17, TNF-α, IFN-γ, A
209719_x_at SERPINB3 Serpin peptidase inhibitor, clade B (ovalbumin), member 3 45.81 8.96 14.48 IFN-γ(−), S
212531_at LCN2 Lipocalin 2 45.74 7.96 13.47 IL-17, TNF-α, IFN-γ(−), A
224204_x_at ARNTL2 Aryl hydrocarbon receptor nuclear translocator-like 2 43.67 4.03 9.48  
213797_at RSAD2 Radical S-adenosyl methionine domain containing 2 41.39 5.03 10.40 IFN-γ
233504_at C9orf84 Chromosome 9 open reading frame 84 40.75 3.70 9.05  
227735_s_at C10orf99 Chromosome 10 open reading frame 99 40.71 7.78 13.13  
203535_at S100A9 S100 calcium–binding protein A9 40.71 9.25 14.60 IL-17, TNF-α, IFN-γ, A
226698_at FCHSD1 FCH and double SH3 domains 1 39.37 5.42 10.72  
220249_at HYAL4 Hyaluronoglucosaminidase 4 39.25 4.25 9.55  
202134_s_at WWTR1 WW domain containing transcription regulator 1 36.95 4.69 9.89 TNF-α(−), IFN-γ(−)
206134_at ADAMDEC1 ADAM-like, decysin 1 36.28 4.32 9.50  
241994_at XDH Xanthine dehydrogenase 35.21 3.41 8.55 IFN-γ
1553434_at CYP4Z2P Cytochrome P450, family 4, subfamily Z, polypeptide 2 pseudogene 34.49 2.22 7.33  
227609_at EPSTI1 Epithelial stromal interaction 1 (breast) 34.32 3.77 8.87  
206008_at TGM1 Transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-γ-glutamyltransferase) 34.05 5.62 10.71 TNF-α, IFN-γ, A
219691_at SAMD9 Sterile α-motif domain containing 9 33.57 4.43 9.50 IFN-γ
240304_s_at TMC5 Transmembrane channel-like 5 33.52 3.11 8.18  
221107_at CHRNA9 Cholinergic receptor, nicotinic, α-9 32.35 3.19 8.21  
204465_s_at INA Internexin neuronal intermediate filament protein, alpha 31.67 3.85 8.83  
239586_at FAM83A Family with sequence similarity 83, member A 31.29 5.43 10.40  
209773_s_at RRM2 Ribonucleotide reductase M2 polypeptide 31.19 5.71 10.67 IFN-γ(−)

Abbreviations: FCH, fold change; FDR, false discovery rate; TNF, tumor necrosis factor.

1

Genes that are induced by IL-17, IFN-γ, and TNF-α in keratinocytes and yield a synergistic (S) or additive (A) effect between IL-17 and TNF on keratinocytes (Nograles et al., 2008; Chiricozzi et al., 2011).