Table 1. Summary of the assembly and annotation of pineapple UTs.
Number of sequences (%) | |
1. Assembly | |
Total number of reads | 9,000,000 |
Total number of reads used for assembly | 4,745,237 |
Total unigenes generated | 28,728 |
2. Similarity Search | |
Unigenes matching to known genes | 13, 407 (46.7%) |
Unigenes matching to unknown genes | 3,525 (12.3%) |
Unigenes matching to no hits | 11,796 (41%) |
3. Functional Annotation | |
Unigenes without mapping | 1,425 |
Unigenes with annotation | 14,510 |
Number of GO terms assigned | 65,637 |