Table 4.
Haplotype information for SNPs across the 401 genotypes of common bean wild and Core collections
| Gene | Region | Haplotype name | Haplotype sequence | Frequency* |
|---|---|---|---|---|
|
Asr1 |
Cultivated |
1 |
T |
56.40% |
| 2 |
C |
43.60% |
||
| Wild intron |
1 |
AC |
12.10% |
|
| 2 |
CT |
9.10% |
||
| 3 |
AT |
78.80% |
||
| Wild exon |
1 |
TCC |
2.70% |
|
| 2 |
CCT |
16.20% |
||
| 3 |
CTC |
81.10% |
||
|
Asr2 |
Total |
1 |
TGC |
85.20% |
| 2 |
ATC |
12.70% |
||
| 3 |
ATG |
1.70% |
||
| 4 |
TGC |
0.30% |
||
| Cultivated** |
1 |
ATG |
93.30% |
|
| 2 |
TAT |
6.70% |
||
| Wild** |
1 |
GCA |
93.30% |
|
| 2 | CAT | 6.70% |
*In bold: frequencies values bigger than 10%.**Haplotypes only observed in heterozygotes are not depicted.