Table A1.

Size (bp) of the alignedT-RF			Corresponding taxa in the identification library1	Assignment	Enzymes used for quantification
HinP1I	Hpy8I	NlaIV
584	811	236	Carnobacterium divergens, C. maltaromaticum	Carnobacterium	All three
370	800	196	Enterobacteriaceae	Enterobacteriaceae	HinP1I
605	841	256	Lactobacillus oligofermentas	L. oligofermentas	HinP1I, NlaIV
603	840	254	Lactobacillus sakei, L. fuchuensis	Lactobacillus	HinP1I, NlaIV
581	216	230	Lactococcus spp.	CLactococcus	All three
204	113	229	Leuconostoc gelidum, L. mesenteroides	Leuconostoc	Hpy8I
204	648	229	Leuconostoc gasicomitatum, L. gelidum, L. carnosum	Leuconostoc	HinP1, NlaIV
242	816	238	Vagococcus fessus2	Vagococcus	All three

¹Nieminen et al. (2011).

²Vagococcus fessus DSM 15697T; T-RFs: HinP1I 242 bp, Hpy8I 814 bp, NlaIV 238 bp.