Table 2. DGGE band identification.
Closest known isolate | Identity (%) | Found in 16S rRNA gene clone library | |
---|---|---|---|
Band 1 | Geobacter sulfurreducens | 99 | Yes |
Band 2 | Alkaliphilus oremlandii | 89 | Yes |
Band 3 | Pseudomonas fluorescens | 99 | Yes |
Band 4 | Clostridium sticklandii | 89 | Yes |
Band 5 | Candidatus Protochlamydia amoebophila | 89 | Yes |
Band 6 | Rhodothermus marinus | 83 | No |
Bartonella quintana | 81 | Yes | |
Band 7 | Exiguobacterium sp. | 88 | No |
Clostridium tetani | 84 | Yes |
Abbreviation: DGGE, denaturing gradient gel electrophoresis