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. 2012 Aug 28;287(43):36499–36508. doi: 10.1074/jbc.M112.344317

TABLE 1.

Primer Sequences

Name of primer/DNA oligonucleotide DNA sequence
Rat TSHβ nTRE (21, 22) (M13897)
    Forward 5′-agagtctgggtcatcacagcattaactcgccagtgcaaagtaaggtaggtctctacccgg-3′
Rat GH TRE (23) (X12967) −198 to −158
    Forward 5′-cgcgtaaaggtaagatcagggacgtgaccgaga-3′
hSUMO1 (NM_001005782.1)
    Forward 5′-ccggagcgaggttctgctta-3′
    Reverse 5′-aagtaatgtcactgtatc-3′
hSUMO2 (NM_006937.3)
    Forward 5′-gcaggatggttctgtggtg-3′
    Reverse 5′-ctgcctcattgacaatccct-3′
hSUMO3 (NM_006936.2)
    Forward 5′-tggaggacgaggacaccat-3′
    Reverse 5′-agcatgcgaggtaggacg-3′
Rat TSHβ nTRE ChIP (80-bp PCR product) (M13897.1)
    Forward 5′-cgaagggtataaaatgaa-3′
    Reverse 5′-gcacttcattttacaggtcctg-3′
Rat GH TRE ChIP (90-bp PCR product) (X1296.7)
    Forward 5′-caaaaggacacattgggtgg-3′
    Reverse 5′-ttgcccaggtttatgggc-3′
TSHβ GSP2 (21, 22) (M13897.1)
    Forward 5′-agcattaactcgccagtgca-3′
TSHβ GSP3 (22) (M13897.1)
    Reverse 5′-atcttatcttatcttgattattttat-3′
TSHβ GSP-reverse (M13897.1)
    Reverse 5′-cgtgtcatacaatacccagc-3′
Rat GH (mRNA) (NM_001034848)
    Forward 5′-ttgttaggtgtcagcagccag-3′
    Reverse 5′-atggctgcagactctcagac-3′
Consensus DR4 TRE sequence 5′-tagctcgaggtcacaggaggtcattgcc-3′
rME TRE sequence (36) −281 to −261 (M35258.1) 5′-aaaggtaagatcagggacgtgaccgcac-3′