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. 2012 Aug 31;287(43):36536–36543. doi: 10.1074/jbc.M112.398396

TABLE 1.

Number of water molecules around reversibly protonated amino acid side chains

Average ± S.E. of the number of water molecules within 3.4 and 5 Å over the MD trajectories from 20 to 50 ns.

Name Protonation state Amino acid 3.4 Å shell 5 Å shell
13protonated 13 neutral +1 charged Deprotonated Glu61 5.41 ± 0.20 8.16 ± 0.38
Protonated Glu61 0.28 ± 0.01 0.92 ± 0.21
14protonated 14 uncharged Protonated Glu61 0.90 ± 0.03 0.58 ± 0.21
0protonated 14 charged Deprotonated Glu61 5.12 ± 0.05 10.97 ± 0.10
Double mutant P24D/E61G (13 + 1) Deprotonated Asp24 3.10 ± 0.12 4.28 ± 0.35
Protonated Asp24 0.44 ± 0.19 1.23 ± 0.41