Table 2.
Human breast cancer and extrogen recptor RT2 profiler PCR array
| Description | Accession #: |
|---|---|
|
Genes Associated with Breast Cancer Prognosis |
|
| Androgen receptor (AR) |
NM_000044 |
| Antigen identified by monoclonal antibody Ki-67 (MKI67) |
NM_002417 |
| B-cell CLL/lymphoma 2 (BCL2) |
NM_000633 |
| BCL2-associated agonist of cell death (BAD) |
NM_004322 |
| BCL2-associated athanogene (BAG1) |
NM_004323 |
| Cadherin 1, type 1, E-cadherin (CDH1) |
NM_004360 |
| Catenin (cadherin-associated protein), beta 1, (CTNNB1) |
NM_001904 |
| Cathepsin B (CTSB) |
NM_001908 |
| Clusterin (CLU) |
NM_001831 |
| Collagen, type VI, alpha 1 (COL6A1) |
NM_001848 |
| Cyclin A1 (CCNA1) |
NM_003914 |
| Cyclin A2 (CCNA2) |
NM_001237 |
| Cyclin D1 (CCND1) |
NM_053056 |
| Cyclin E1 (CCNE1) |
NM_001238 |
| Cyclin-dependent kinase inhibitor 1A (CDKN1A) |
NM_000389 |
| Cyclin-dependent kinase inhibitor 1B (CDKN1B) |
NM_004064 |
| Cyclin-dependent kinase inhibitor 2A (CDKN2A) |
NM_000077 |
| Epidermal growth factor receptor (EGFR) |
NM_005228 |
| Estrogen receptor 1 (ESR1) |
NM_000125 |
| Estrogen receptor 2 (ESR2) |
NM_001437 |
| Fas ligand (TNF superfamily, member 6) (FASLG) |
NM_000639 |
| FOS-like antigen 1 (FOSL1) |
NM_005438 |
| GATA binding protein 3 (GATA3) |
NM_002051 |
| Gelsolin (GSN) |
NM_000177 |
| Inhibitor of DNA binding 2 (ID2) |
NM_002166 |
| Insulin-like growth factor binding protein 2 (IGFBP2) |
NM_000597 |
| Integrin, alpha 6 (ITGA6) |
NM_000210 |
| Integrin, beta 4 (ITGB4) |
NM_000213 |
| Interleukin 2 receptor, alpha (IL2RA) |
NM_000417 |
| Interleukin 6 (IL6) |
NM_000600 |
| Interleukin 6 receptor (IL6R) |
NM_000565 |
| Interleukin 6 signal transducer (IL6ST) |
NM_002184 |
| Jun oncogene (JUN) |
NM_002228 |
| Kallikrein-related peptidase 5 (KLK5) |
NM_012427 |
| Keratin 19 (KRT19) |
NM_002276 |
| Kruppel-like factor 5 (KLF5) |
NM_001730 |
| Mitogen-activated protein kinase kinase 7 (MAP2K7) |
NM_145185 |
| Mucin 1, cell surface associated (MUC1) |
NM_001018016 |
| Nerve growth factor (NGF) |
NM_002506 |
| Nerve growth factor receptor (NGFR) |
NM_002507 |
| Prostaglandin-endoperoxide synthase 2 (PTGS2) |
NM_000963 |
| TNF receptor superfamily, member 6 (FAS) |
NM_000043 |
| V-erb-b2 erythroblastic leukemia viral oncogene homolog 2 (ERBB2) |
NM_004448 |
|
Genes Associated with Estrogen Receptor Signaling |
|
| Non-metastatic cells 1 (NME1) |
NM_000269 |
| Phosphatase and tensin homolog (PTEN) |
NM_000314 |
| Plasminogen activator, urokinase (PLAU) |
NM_002658 |
| Progesterone receptor (PGR) |
NM_000926 |
| Serpin peptidase inhibitor, clade B, member 5 (SERPINB5) |
NM_002639 |
| Serpin peptidase inhibitor, clade E, member 1 (SERPINE1) |
NM_000602 |
| Thrombospondin 1 (THBS1) |
NM_003246 |
| Topoisomerase (DNA) II alpha (TOP2A) |
NM_001067 |
| Transforming growth factor, alpha (TGFA) |
NM_003236 |
| Tumor protein p53 (TP53) |
NM_000546 |
| Tyrosine kinase with immunoglobulin-like and EGF-like domains 1 (TIE1) |
NM_005424 |
| Vascular endothelial growth factor A (VEGFA) |
NM_003376 |
|
Genes Associated with Response to Chemotherapy |
|
| Cathepsin D (CTSD) |
NM_001909 |
| Complement component 3 (C3) |
NM_000064 |
| Heat shock 27 kDa protein 1 (HSPB1) |
NM_001540 |
| Keratin 18 (KRT18) |
NM_000224 |
| Serpin peptidase inhibitor, member 3 (SERPINA3) |
NM_001085 |
| Solute carrier family 7, member 5 (SLC7A5) |
NM_003486 |
| Stanniocalcin 2 (STC2) |
NM_003714 |
| Trefoil factor 1 (TFF1) |
NM_003225 |
|
Genes Associated with Breast Cancer Diagnosis and Progression |
|
| BCL2-like 2 (BCL2L2) |
NM_004050 |
| CD44 molecule (CD44) |
NM_000610 |
| Claudin 7 (CLDN7) |
NM_001307 |
| Cytochrome P450, family 19, subfamily A, polypeptide (CYP19A1) |
NM_000103 |
| Deleted in liver cancer 1 (DLC1) |
NM_006094 |
| Fibroblast growth factor 1 (FGF1) |
NM_000800 |
| Fibronectin leucine rich transmembrane protein 1 (FLRT1) |
NM_013280 |
| Gamma-aminobutyric acid (GABA) A receptor, pi (GABRP) |
NM_014211 |
| GNAS complex locus (GNAS) |
NM_080425 |
| High-mobility group box 1 (HMGB1) |
NM_002128 |
| Metallothionein 3 (MT3) |
NM_005954 |
| Nuclear transcription factor Y, beta (NFYB) |
NM_006166 |
| Pregnancy-associated plasma protein A, pappalysin 1 (PAPPA) |
NM_002581 |
| Ras-related C3 botulinum toxin substrate 2 (RAC2) |
NM_002872 |
| Ribosomal protein L27 (RPL27) |
NM_000988 |
| Secretoglobin, family 1D, member 2 (SCGB1D2) |
NM_006551 |
| Secretoglobin, family 2A, member 1 (SCGB2A1) |
NM_002407 |
| Small proline-rich protein 1B (SPRR1B) |
NM_003125 |
| Thrombospondin 2 (THBS2) |
NM_003247 |
| Tumor necrosis factor, alpha-induced protein 2 (TNFAIP2) |
NM_006291 |
| V-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT) |
NM_000222 |
|
Housekeeping Genes |
|
| Actin, beta (ACTB) |
NM_001101 |
| Beta-2-microglobulin (B2M) |
NM_004048 |
| Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |
NM_002046 |
| Hypoxanthine phosphoribosyltransferase 1 (HPRT1) |
NM_000194 |
| Ribosomal protein L13a (RPL13A) | NM_012423 |