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. 2012 Jun 29;420(1-2):56–69. doi: 10.1016/j.jmb.2012.03.028

Fig. 1.

Fig. 1

Multiple sequence alignment of representative members of the gammaproteobacteria families Enterobacteriaceae and Vibrionaceae. Only nonredundant sequences (<   95% amino acid identity) are shown. The boundaries for the NTD and CTR are indicated. The depicted regular secondary-structure elements correspond to the crystal structure of E. coli Hfq (EcHfq) (PDB ID: 1HK9)14 with β-strands as arrows and the α-helix as a spiral. Positions are colored according to the Clustal color scheme: glycines are orange and prolines are yellow; other positions are colored according to conservation of chemical properties: hydrophobic in blue, aromatic in cyan, polar negative in purple, polar positive in red, and polar neutral in green. An alignment including other gammaproteobacteria families is shown in Fig. S2.