Table 1.
The number of reads mapped to RefSeq sequences and RP pseudogenes for both the composite genome and the unaltered human genome (hg18) for each tissue
| Tissue |
RP Pseudogenes |
RefSeq Sequences |
||||
|---|---|---|---|---|---|---|
| Composite genome | hg18 | Ratio | Composite genome | hg18 | Ratio | |
| Adipose |
708 |
22613 |
0.03 |
22018081 |
23753007 |
0.93 |
| Adrenal |
2439 |
22280 |
0.11 |
19436010 |
21074345 |
0.92 |
| Brain |
712 |
3853 |
0.18 |
11585759 |
12357788 |
0.94 |
| Breast |
1603 |
15951 |
0.10 |
22962845 |
23060856 |
1.00 |
| Colon |
1066 |
22948 |
0.05 |
21458813 |
21618780 |
0.99 |
| Heart |
562 |
2374 |
0.24 |
12622175 |
13502482 |
0.93 |
| Kidney |
1341 |
5928 |
0.23 |
20630500 |
22278600 |
0.93 |
| Liver |
328 |
2359 |
0.14 |
16689110 |
17958332 |
0.93 |
| Lung |
1128 |
11918 |
0.09 |
28648503 |
31274037 |
0.92 |
| Lymph |
1456 |
14010 |
0.10 |
22126747 |
23998836 |
0.92 |
| Muscle |
459 |
8705 |
0.05 |
25836676 |
27662752 |
0.93 |
| Ovary |
1501 |
34608 |
0.04 |
21842763 |
23663484 |
0.92 |
| Prostate |
1280 |
14976 |
0.09 |
30329651 |
32822472 |
0.92 |
| Testes |
1885 |
19417 |
0.10 |
23356973 |
25123824 |
0.93 |
| Thyroid |
4064 |
22250 |
0.18 |
24800037 |
26627946 |
0.93 |
| White Blood Cells |
1095 |
14256 |
0.08 |
25487259 |
27812790 |
0.92 |
| Average | 1351 | 14902 | 0.11 | 21864493 | 23411895 | 0.94 |
The ratio is calculated by the number of mapped reads from the composite genome over the number of mapped reads from the unaltered human genome (hg18).