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. Author manuscript; available in PMC: 2013 Oct 22.
Published in final edited form as: J Chem Inf Model. 2012 Sep 28;52(10):2784–2795. doi: 10.1021/ci300178e

Figure 9.

Figure 9

The structure alignment performance of G-LoSA against evolutionary non-related proteins. (A) BS-structures of Artocarpus Integer artocarpin (PDB:1VBP) and Pterocarpus Angolensis lectin (PDB:1Q8Q), aligned by G-LoSA. (B) BS-structures of human estrogen receptor α ligand-binding domain (PDB:1A52) and human 17-β-hydroxysteroid-dehydrogenase type 1 (PDB:1FDT), aligned by G-LoSA. (C) The same structures to Figure B, but the structures are superposed using the ligand coordinates. In Figure A and B, the aligned Cα-atoms (inter-Cα distance ≤ 2.5 Å) are represented as spheres.