Table 2. Comparison of the risk allele frequencies for rs2025804, rs12029311, and rs6662904 in the Pima Indian and HapMap populations.
The allele frequencies for the HapMap populations were obtained from the HapMap SNPs track, UCSC Genome Browser, build 37.1.
| Population | rs2025804 | rs12029311 | rs6662904 |
|---|---|---|---|
|
| |||
| G | A | G | |
| Full-heritage Pima Indians, Arizona, USA | 0.73 | 0.25 | 0.70 |
| Utah residents with ancestry from northern and western Europe (CEU) | 0.40 | 0.00 | 0.54 |
| Toscani in Italia (TSI) | 0.27 | 0.006 | 0.51 |
| Yoruba in Ibadan, Nigeria (YRI) | 0.22 | 0.00 | 0.994 |
| Luhya in Webuye, Kenya (LWK) | 0.22 | 0.006 | - |
| Maasai in Kinyawa, Kenya (MKK) | 0.15 | - | 0.96 |
| African Ancestry in SW USA (ASW) | 0.19 | 0.02 | 0.91 |
| Han Chinese in Beijing, China (CHB) | 0.84 | 0.22 | 0.96 |
| Chinese in Metropolitan Denver, CO, USA (CHD) | 0.89 | 0.23 | 0.97 |
| Japanese in Tokyo, Japan (JPT) | 0.85 | 0.20 | 0.91 |
| Gujarati Indians in Houston, Texas, USA (GIH) | 0.21 | 0.02 | 0.65 |
| Mexican Ancestry in Los Angeles, CA, USA (MXL) | 0.34 | - | 0.69 |