Table 5.

HPD gene set overlapping cluster membership

Pathway Name, (enrichment p-value)	HPD similarity grouping	de novo Gene Membership	de novo Gene Ontology	de novo Protein Interactants	Weighted Consolidation	Enrichment Consolidation
Aurora B signaling (p = 1.32 × 10-2)	■	▲	■	▲	▲	■
Aurora A signaling (p = 1.39 × 10-4)	■	■	■	■	■	■
Signaling by Aurora kinases (p = 3.27 × 10-4)	■	■	■	■	■	■
FOXA transcription factor networks (p = 2.23 × 10-4)	●	●	■	●	●	■
FOXA1 transcription factor network (p = 6.53 × 10-5)	●	●	■	●	●	■
FOXA2 and FOXA3 transcription factor networks (p = 1.38 × 10-2)	●	●	■	♦	♦	■
Fanconi Anemia pathway (p = 8.36 × 10-3)	▲	▼	►	►	►	■
ATRBRCA_PATHWAY (p = 6.75 × 10-3)	▲	►	►	►	►	■
ATM mediated phosphorylation of repair proteins (p = 1.93 × 10-3)	►	►	►	▼	►	■
Recruitment of repair and signaling proteins to double-strand breaks (p = 2.58 × 10-3)	►	►	►	▼	►	■

Note: p-values are derived from one-tail Fisher's Exact test, before multiple test correction. Dividers and matching symbols indicate pathways groups within a consolidation method.