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. 2012 Mar 31;41(3):82–94.

Table 1:

Fragment size of the ITS1-5.8S-ITS2 regions in tested species of dermatophytes before and after in silico digestion with MvaI

Species of dermatophyte GenBank accession no. for ITS1-5.8S-ITS2 regions Size of the ITS1-5.8S-ITS2 (bp) Size of fragments after digestion with MvaI
A. vanbreuseghemii, T. interdigitale AF170465, AJ270790 683 247, 159, 124, 89, 50, 14 (1st pattern)
A. vanbreuseghemii (T. interdigitale) AB246678 683 406, 124, 89, 50, 14 (2nd pattern)
A. benhamiae Z98015 679 360, 158, 141, 20
T. erinacei Z97997 679 360, 157, 142, 20
T. simii Z98017 685 372, 159, 90, 50, 14 (1st pattern)
T. simii AJ000605 685 372, 159, 104, 50 (2nd pattern)
T. mentagrophytes (T. m. var quinckeanum) Z97995 683 406, 124, 103, 50
T. schoenleinii Z98011 685 405, 124, 104, 52
T. verrucosum Z98003 678 517, 141, 20
M. persicolor EU181457 670 323, 148, 112, 68, 19
T. rubrum AF170471 692 368, 164, 95, 65
T. violaceum AJ270796, EU590656 701, 711 369, 161(164), 106(114), 45, 20
T. gourvilii EU181448 710 368, 164, 113, 45, 20
T. yaoundei AJ270811, FJ479792 700, 710 368, 164, 103 (113), 45, 20
T. soudanense EF631621, AF170473 690 368, 164, 93, 45, 20
T. tonsurans EF043270 688 251, 124, 103, 90, 56, 50, 14
T. equinum EF043274 688 251, 124, 103, 90, 56, 50, 14
E. floccosum AY213646 780 361, 231, 169, 20
M. canis EU200371 737 441, 165, 103, 28
M. ferrugineum EF581133 737 441, 165, 103, 28
M. audouinii AJ000625 734 441, 162, 131
M. nanum AJ970149 628 459, 150, 19
M. gallinae (M. vanbreuseghemii) AJ000620 (AJ970147) 614 (617) 319 (323), 150 (149), 126, 19
M. fulvum AM850135 652 322, 147, 112, 52, 19
A. uncinatum (T. ajelloi) EF568086 658 271, 195, 192 (1st pattern)
A. uncinatum (T. ajelloi) AJ000608 657 465, 192 (2nd pattern)
A. gypseum (M. gypseum) EF568061 666 289,179, 146, 33, 19 (1st pattern)
A. incurvatum (M. gypseum) AJ000621 619 389, 147, 64, 19 (2nd pattern)
M. racemosum AJ970146 701 225, 165, 144, 120, 47
M. cookei AB193713 701 225, 166, 143, 120, 47