Table 2.
Cell wall associated protein localization.
| ID | MapMan Bin (cell wall.*) | Gene ID | Description |
|---|---|---|---|
| CHLOROPLAST | |||
| 1 | Hemicellulose synthesis | AT5G16890 | Exostosin family protein |
| CYTOSOL | |||
| 2 | Precursorsynthesis.UGD | AT5G39320 | UDP-glucose 6-dehydrogenase, putative |
| 3 | Precursorsynthesis.UGD | AT5G15490 | UDP-glucose 6-dehydrogenase, putative |
| 4 | Precursorsynthesis.AXS | AT1G08200 | AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2) |
| 5 | Precursorsynthesis.RHM | AT3G14790 | RHM3 (RHAMNOSE BIOSYNTHESIS 3) |
| 6 | Precursorsynthesis.AXS | AT2G27860 | AXS1 (UDP-D-apiose/UDP-D-xylose synthase 1) |
| 7 | Cellwall.precursorsynthesis.UGE | AT1G12780 | UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1) |
| 8 | Precursorsynthesis.NDP sugar pyrophosphorylase.GDP mannose | AT2G39770 | GMP1 mannose-1-phosphate guanylyltransferase |
| ER | |||
| 9 | Cellulosesynthesis.cellulose synthase | AT1G23480 | CSLA03 (CELLULOSE SYNTHASE-LIKE A3) |
| GOLGI | |||
| 10 | Precursorsynthesis.UXS | AT3G62830 | UXS2, UDP-glucuronate decarboxylase |
| 11 | Precursorsynthesis.UGE | AT1G64440 | UGE4, UDP-glucose 4-epimerase |
| 12 | Hemicellulosesynthesis.xyloglucan.XXXGgalactoseTransferase | AT2G20370 | MUR3 |
| 13 | Hemicellulosesynthesis.glucuronoxylan | AT5G22940 | F8H (FRA8 HOMOLOG |
| 9 | Cellwall.cellulosesynthesis.cellulose synthase | AT1G23480 | CSLA03 (CELLULOSE SYNTHASE-LIKE A3) |
| 14 | Cellwall.modification | AT5G57560 | XTH22/Touch 4 (xyloglucan:xyloglucosyltransferase) |
| 15 | Cellwall.modification | AT4G25810 | XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6) |
| GPI ANCHOR | |||
| 16 | Cell wall proteins.AGPs | AT2G46330 | AGP16 (ARABINOGALACTAN PROTEIN 16) |
| MITOCHONDRIA | |||
| 17 | Precursorsynthesis.KDOpathway.CMP-KDO synthetase | AT1G53000 | Cytidylyltransferase family |
| NUCLEUS | |||
| 2 | Precursorsynthesis.UGD | AT5G39320 | UDP-glucose 6-dehydrogenase, putative |
| 3 | Precursorsynthesis.UGD | AT5G15490 | UDP-glucose 6-dehydrogenase, putative |
| PLASMA MEM. | |||
| 7 | Precursorsynthesis.UGE | AT1G12780 | UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1) |
| 18 | Hemicellulose synthesis | AT1G18690 | Transferase/transferase, transferring glycosyl groups |
| 19 | Cellulose synthesis | AT3G28180 | CSLC4 (CELLULOSE-SYNTHASE LIKE C4) |
| 20 | Cellulosesynthesis.cellulose synthase | AT4G32410 | CESA1 (CELLULOSE SYNTHASE 1) |
| 21 | Cellulosesynthesis.cellulose synthase | AT5G17420 | CESA7; cellulose synthase |
| 22 | Cellwall.modification | AT2G40610 | ATEXPA8 (EXPANSIN A8) |
| 23 | Cellwall.modification | AT3G45970 | ATEXLA1 (EXPANSIN-LIKE A1) |
| 24 | Cellwall.modification | AT4G38400 | ATEXLA2 (EXPANSIN-LIKE A2) |
| 14 | Cellwall.modification | AT5G57560 | XTH22/Touch 4 (xyloglucan:xyloglucosyltransferase) |
| 15 | Cellwall.modification | AT4G25810 | XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6) |
| 3 | Precursorsynthesis.UGD | AT5G15490 | UDP-glucose 6-dehydrogenase, putative |
| PLASMODESMA | |||
| 11 | Precursorsynthesis.UGE | AT1G64440 | UGE4, UDP-glucose 4-epimerase |
| 25 | Cellulose synthesis | AT4G07960 | CSLC12 (CELLULOSE-SYNTHASE LIKE C12) |
*
This table shows cell wall associated genes exhibiting significant up-regulation at one or more time points organized by cellular location. MapMan bin names are shortened by removing the common prefix “cell wall.”