Table 3.
Secretory protein localization.
| ID | MapMan Bin (protein.targeting.*) | Gene ID | Description |
|---|---|---|---|
| CYTOSOL | |||
| 1 | Secretorypathway.unspecified | AT5G46630 | Clathrin adaptor complexes medium subunit |
| 2 | Secretorypathway.golgi | AT4G01810 | Protein transport protein-related |
| 3 | Secretorypathway.golgi | AT4G32640 | Protein binding/zinc ion binding |
| ENDOSOME | |||
| 4 | Secretorypathway.vacuole | AT5G06140 | SNX1 (SORTING NEXIN 1) |
| ENDOSOME TO VACUOLE | |||
| 5 | Secretorypathway.unspecified | AT4G05000 | VPS28-2 |
| ER | |||
| 6 | Secretory pathway.ER | AT2G38960 | AERO2 (endoplasmic reticulum oxidoreductins 2) |
| 7 | Secretory pathway.ER | AT2G39960 | Microsomal signal peptidase 25 kDa subunit |
| 8 | Secretory pathway.ER | AT1G72280 | AERO1 (endoplasmic reticulum oxidoreductins 1) |
| ER TO GOLGI | |||
| 9 | Secretorypathway.unspecified | AT1G11890 | SEC22 |
| GOLGI | |||
| 2 | Secretorypathway.golgi | AT4G01810 | Protein transport protein-related |
| 3 | Secretorypathway.golgi | AT4G32640 | Protein binding/zinc ion binding |
| 10 | Cellwall.hemicellulosesynthesis.xyloglucan.XXXGgalactoseTransferase | AT2G20370 | MUR3 (MURUS 3) |
| 11 | Cellwall.hemicellulosesynthesis.glucuronoxylan | AT5G22940 | F8H (FRA8 HOMOLOG) |
| GOLGI TO ER | |||
| 12 | Secretory pathway.ER | AT2G21600 | ATRER1B |
| 13 | Secretory pathway.ER | AT4G39220 | ATRER1A |
| GOLGI TO VACUOLE | |||
| 14 | Secretorypathway.unspecified | AT1G56590 | Clathrin adaptor complexes medium subunit |
| 15 | Secretorypathway.vacuole | AT1G77140 | VPS45 (VACUOLAR PROTEIN SORTING 45) |
| PLASMA MEM. | |||
| 16 | Secretorypathway.unspecified | AT3G48570 | SEC61 gamma subunit, putative |
| 17 | Secretorypathway.unspecified | AT1G48240 | NPSN12 |
| 18 | Secretorypathway.unspecified | AT1G52600 | Signal peptidase, putative |
| 1 | Secretorypathway.unspecified | AT5G46630 | Clathrin adaptor complexes medium subunit |
| 19 | Secretorypathway.unspecified | AT2G34250 | Protein transport protein sec61, putative |
| 4 | Secretorypathway.vacuole | AT5G06140 | SNX1 (SORTING NEXIN 1) |
| VACUOLE | |||
| 20 | Secretorypathway.vacuole | AT2G05170 | ATVPS11 |
| VACUOLE TO PLASMA MEM. | |||
| 21 | Secretorypathway.unspecified | AT3G56190 | SNAP2 (ALPHA-SOLUBLE ATTACHMENT PROTEIN 2) |
| VESICLES (GOLGI TO PLASMA MEM.) | |||
| 22 | Secretorypathway.vacuole | AT2G14740 | ATVSR3 (VACULOLAR SORTING RECEPTOR 3) |
| VESICLES (GOLGI TO PLASMA MEM.) -CLATHRIN | |||
| 1 | Secretorypathway.unspecified | AT5G46630 | Clathrin adaptor complexes medium subunit |
| 23 | Secretorypathway.unspecified | AT1G10730 | Clathrin adaptor complexes medium subunit |
| 24 | Secretorypathway.unspecified | AT4G35410 | Clathrin adaptor complex small chain |
| UNSPECIFIED | |||
| 25 | Secretorypathway.unspecified | AT1G53530 | Signal peptidase I family protein |
| 26 | Secretorypathway.unspecified | AT5G17060 | ATARFB1B |
| 27 | Secretorypathway.unspecified | AT1G67680 | 7S RNA binding |
*
This table shows protein-targeting associated genes exhibiting significant up-regulation at one or more time points organized by cellular location. MapMan bin names are shortened by removing the common prefix “protein.targeting.”