Table 2.
Estimation of nucleotide sequence divergences at synonymous sites (Ks) for the virB gene cluster
| Gene | H1-IC11 | H1-UGA10 | IC11-UGA10 | Recombination* |
|---|---|---|---|---|
|
virB1 |
0.045 |
0.045 |
0.077 |
|
|
virB2 |
0.221 |
0.297 |
0.276 |
|
|
virB3 |
0.024 |
0.012 |
0.012 |
|
|
virB4 |
0.040 |
0.042 |
0.054 |
++ |
|
virB5 |
0.104 |
0.180 |
0.112 |
++ |
|
virB6 |
0.057 |
0.012 |
0.042 |
++ |
|
virB7 |
0.009 |
0.000 |
0.009 |
|
|
virB8 |
0.012 |
0.017 |
0.030 |
|
|
virB9 |
0.062 |
0.016 |
0.047 |
++ |
|
virB10 |
0.010 |
0.022 |
0.024 |
|
|
virB11 |
0.000 |
0.072 |
0.073 |
|
|
virB12 |
0.000 |
0.135 |
0.138 |
|
|
bepA |
0.000 |
0.136 |
0.136 |
|
|
virD4 |
0.000 |
0.026 |
0.027 |
|
|
bepB |
0.000 |
0.018 |
0.018 |
|
|
bepC |
0.144 |
0.142 |
0.000 |
|
|
bepD |
-- |
0.140 |
-- |
|
|
bepE |
0.155 |
0.255 |
0.290 |
++ |
|
bepF |
0.009 |
0.020 |
0.034 |
++ |
| bepG | 0.006 | 0.014 | 0.012 | ++ |
* Recombination sites were identified by GENECONV.