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. 2012 Nov;22(11):2290–2301. doi: 10.1101/gr.139360.112

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© 2012, Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 3.0 Unported License), as described at http://creativecommons.org/licenses/by-nc/3.0/.

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Figure 6. — Analysis of kmer-SVM classifier trained with putative melanocyte enhancers. (A) Receiver operating characteristic curve for kmer-SVM classifier trained on putative melanocyte enhancers, with overall area under curve (auROC = 0.912) (B) Precision-recall curve with area under curve (auPRC = 0.297). (C) 6-mers with highest positive predictive value to kmer-SVM classifier, and factors predicted to bind each 6-mer. (*) No PWM in queried databases. Match based on similarity to published binding specificities (see Methods).