Table 1.
Overview of tag number
| No. of clean tag | No. (%) of Unambiguous mapped Tag | No. (%) of Unambiguous tag-matched unigene | No. (%) of unknown tag | ||
|---|---|---|---|---|---|
| Time of hypocotyls cultured (h) |
0 |
3713673 |
1551964(41.79) |
13446(65.05) |
1994178(53.70) |
| 6 |
3574921 |
1361344(38.08) |
13513(65.37) |
2093782(58.57) |
|
| 24 |
3421294 |
1393380(40.73) |
13781(66.67) |
1891802(55.29) |
|
| 48 |
3433665 |
1239777(36.11) |
12595(60.93) |
1970515(57.39) |
|
| Noembryogenic calli |
3649041 |
1423394(39.01) |
12687(61.38) |
2013798(55.19) |
|
| Embryogenic calli |
3542887 |
1237924(34.94) |
12230(59.17) |
2185187(61.68) |
|
| Globular embryo |
3542767 |
1333449(37.64) |
12406(60.02) |
2113500(59.66) |
|
| Torpedo embryo |
3662505 |
1427168(38.97) |
12749(61.68) |
2134578(58.28) |
|
| Cotyledon embryo |
3567705 |
1258997(35.29) |
12649(61.19) |
2162331(60.61) |
|
| Average | 3567606 | 1358600(38.06) | 12895(62.38) | 2062186(57.82) | |