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. 2012 Oct 5;91(4):744–753. doi: 10.1016/j.ajhg.2012.08.021

Table 2.

Loci with Strong Evidence of Association with Serum Albumin and Total Protein after Transethnic MANTRA Analysis of European-Ancestry and Japanese GWASs

Lead SNP Chr Position (Build 36) Alleles
European Ancestry GWAS Meta-analysis
Japanese GWAS
MANTRA Transethnic Meta-analysis
Locus
Effect Other EAF Beta SE p Value Sample Size EAF Beta SE p Value Sample Size log10BF Association log10BF Heterogeneity
Serum Albumin Established Loci

rs1260326 2 27,584,444 T C 0.41 0.0124 0.0016 2.9 × 10−14 53,189 0.56 0.0270 0.0050 2.2 × 10−8 9,380 17.01 0.28 GCKR-FNDC4
rs4806073 19 40,247,030 C T 0.93 0.0257 0.0033 3.3 × 10−15 53,187 0.92 0.0380 0.0090 1.3 × 10−5 9,380 15.81 −0.08 HPN-SCN1B
rs11078597 17 1,565,113 C T 0.18 0.0205 0.0029 6.8 × 10−13 38,231 0.18 0.0200 0.0060 1.8 × 10−3 9,380 12.51 0.20 SERPINF2-WDR81
rs694419 18 58,277,092 T C 0.52 0.0093 0.0016 1.2 × 10−8 53,189 0.05 0.0180 0.0110 9.2 × 10−2 9,380 7.05 −0.11 TNFRSF11A-ZCCHC2
rs2280401 19 54,691,821 A G 0.17 0.0121 0.0024 7.6 × 10−7 53,189 0.16 0.0240 0.0070 3.1 × 10−4 9,380 6.96 0.13 RPS11-FCGRT
rs16948098 15 42,006,899 A C 0.06 0.0229 0.0041 1.9 × 10−8 53,189 0.00 4.79 FRMD5-WDR76

Serum Albumin Additional Potential Loci

rs2293579 11 47,397,334 A G 0.40 0.0093 0.0017 8.0 × 10−8 53,189 0.26 0.0030 0.0050 5.7 × 10−1 9,380 5.61 −0.05 PSMC3
rs12914385 15 76,685,778 C T 0.61 0.0064 0.0016 8.7 × 10−5 53,189 0.70 0.0200 0.0050 1.3 × 10−4 9,380 5.07 0.12 CHRNA3- CHRNA5

Total Protein Established Loci

rs4561508 17 16,789,475 T C 0.11 0.0360 0.0060 1.3 × 10−9 25,534 0.37 0.0470 0.0700 2.0 × 10−11 10,168 16.25 −0.00 TNFRSF13B
rs204999 6 32,217,957 A G 0.74 0.0250 0.0040 3.4 × 10−9 25,537 0.94 0.0420 0.0130 1.7 × 10−3 10,168 9.01 0.10 6q21.3
rs2280401 19 54,691,821 A G 0.16 0.0120 0.0050 1.5 × 10−2 25,537 0.16 0.0500 0.0090 6.5 × 10−8 10,168 5.19 0.96 RPS11-FCGRT

Total Protein Additional Potential Loci

rs3777200 5 95,260,547 T C 0.27 0.0180 0.0040 1.9 × 10−5 25,524 0.30 0.0290 0.0070 1.1 × 10−4 10,168 6.57 −0.14 ELL2
rs1260326 2 27,584,444 T C 0.44 0.0150 0.0040 1.1 × 10−4 25,537 0.56 0.0310 0.0070 3.7 × 10−6 10,168 5.93 −0.02 GCKR-FNDC4
rs2675609 10 63,306,537 T C 0.39 0.0090 0.0040 1.4 × 10−2 25,537 0.43 −0.0360 0.0070 1.7 × 10−6 10,168 5.81 6.79 ARID5B
rs10097731 8 82,190,227 T G 0.15 0.0230 0.0050 1.1 × 10−5 25,537 0.17 0.0310 0.0090 5.9 × 10−4 10,168 5.67 0.19 PAG1

Strong evidence is defined as log10 BF > 5. The following abbreviations are used: Chr, chromosome; GWAS, genome-wide association study; MANTRA, meta-analysis of transethnic association studies; EAF, effect allele frequency; and BF, Bayes factor.