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. 2012 Jul 2;12:130. doi: 10.1186/1471-2180-12-130

Table 2.

Detection of specific regions of Tn6164 in PCR ribotype 078 strains

Strain PCR 1-2* PCR1-3§ PCR 4-5# PCR 6-7 PCR 8-9 PCR 12-2‡
56/69
-
+
+
-
-
+
26222
-
+
+
-
-
+
26114
-
+
+
-
-
+
26247
-
+
+
-
-
+
26235
-
+
+
-
-
+
ES1203
-
+
+
-
-
n.t.
6065935
-
+
+
-
n.t.
n.t.
7047337
-
+
+
-
n.t.
n.t.
8088158
-
+
+
-
n.t.
n.t.
50/19
-
+
+
+
+
-
GR0106
-
+
+
+
+
n.t.
DE1210
-
+
+
+
+
n.t.
BG1209
-
+
+
+
+
n.t.
NO1311
-
+
+
+
+
n.t.
NO1307
-
+
+
+
+
n.t.
IE1102
-
+
+
+
+
n.t.
GR0301
-
+
+
+
+
n.t.
10053737 - + + + n.t. n.t.

*PCR only positive when no insert is present, §PCR only positive when insert is present #PCR detects Module B, PCR detects module E, PCR detects module D. ‡ PCR only positive in strains containing half of the element. Location of the oligonucleotides used is indicated in Figure 1. +, PCR positive; -, PCR negative; n.t., not tested.