Table 2.
Detection of specific regions of Tn6164 in PCR ribotype 078 strains
| Strain | PCR 1-2* | PCR1-3§ | PCR 4-5# | PCR 6-7 | PCR 8-9† | PCR 12-2‡ |
|---|---|---|---|---|---|---|
| 56/69 |
- |
+ |
+ |
- |
- |
+ |
| 26222 |
- |
+ |
+ |
- |
- |
+ |
| 26114 |
- |
+ |
+ |
- |
- |
+ |
| 26247 |
- |
+ |
+ |
- |
- |
+ |
| 26235 |
- |
+ |
+ |
- |
- |
+ |
| ES1203 |
- |
+ |
+ |
- |
- |
n.t. |
| 6065935 |
- |
+ |
+ |
- |
n.t. |
n.t. |
| 7047337 |
- |
+ |
+ |
- |
n.t. |
n.t. |
| 8088158 |
- |
+ |
+ |
- |
n.t. |
n.t. |
| 50/19 |
- |
+ |
+ |
+ |
+ |
- |
| GR0106 |
- |
+ |
+ |
+ |
+ |
n.t. |
| DE1210 |
- |
+ |
+ |
+ |
+ |
n.t. |
| BG1209 |
- |
+ |
+ |
+ |
+ |
n.t. |
| NO1311 |
- |
+ |
+ |
+ |
+ |
n.t. |
| NO1307 |
- |
+ |
+ |
+ |
+ |
n.t. |
| IE1102 |
- |
+ |
+ |
+ |
+ |
n.t. |
| GR0301 |
- |
+ |
+ |
+ |
+ |
n.t. |
| 10053737 | - | + | + | + | n.t. | n.t. |
*PCR only positive when no insert is present, §PCR only positive when insert is present #PCR detects Module B, ¶PCR detects module E, †PCR detects module D. ‡ PCR only positive in strains containing half of the element. Location of the oligonucleotides used is indicated in Figure 1. +, PCR positive; -, PCR negative; n.t., not tested.