Table 3.
Name | Sequence | Purpose |
---|---|---|
1 |
GAGATATGGTTATGAGATTAGG |
Presence/absence of insert |
2 |
CCCACCTTTATAGCATCATATAG |
Absence of insert |
3 |
CTAACCTATCAACTCAACCCC |
Presence of insert |
4 |
AGGATAAGACCGCAGCAGAA |
Presence 5’half of insert |
5 |
AAAAACGACGGTTTTCCTGTG |
Presence 5’half of insert |
6 |
GGGCAAATAGAAAGTCAAAACG |
Presence 3’half of insert |
7 |
AAGTGGTGTTTTCTTTGGAGGA |
Presence 3’half of insert |
8 |
CCACAGGGATACCTTTCTCGTGC |
Presence of tet(44) gene |
9 |
TTCCATATCCTCGGGTTTTTGCAT |
Presence of tet(44) gene |
10 |
CAGGTGTTGAAATAGATATTGAG |
Detect 3' end half insert |
11 |
CAGAAGTCGATCCTTTCTGGG |
Detect 3' end half insert |
12 |
GGTGGCTGAACTCGTTAATC |
Detect 3' end half insert |
13 |
CTCCACATGGCTCGAGTTG |
Detect 3' end half insert |
14 |
GAGGAATTTAACAGAACAGTATTT |
Excision studies |
15 |
TCTATCCTGCCTTCTCAACC |
Excision studies |
16 |
CGAATCGCTGAAATGACTGA |
Excision studies |
17 |
GCGAATGATTTCATGGAAGG |
Excision studies |
18 |
CGACTGCATTACCAGTTCCA |
Excision studies |
Lok1 [13] |
AAAATATACTGCACATCTGTATAC |
Transconjugant screening |
Lok3 [13] |
TTTACCAGAAAAAGTAGCTTTAA |
Transconjugant screening |
19 |
CAGCTGCAGTTTTTCCATGA |
Transconjugant screening |
20 |
GCAGCTAACGGTGATGACAA |
Transconjugant screening |
Tn916 Fw [30] |
GACGGAAGATACTTATACA |
Transconjugant screening |
Tn916 Rev [30] | GCCTTTGGATTCATTCCTGC | Transconjugant screening |