Table 1. Clones isolated from the basophil-like cell cDNA library.
Name of protein | Genbank accession number | No. of sequences |
Lineage specific proteins | ||
Major basic protein (MBP, proteoglycan 2) | BC005929, Y00809, NM_002728 | 18 |
Charcot Leyden–crystal protein (CLC) | L01664 | 2 |
Proteoglycan 1 | X17042 | 2 |
MBP-homologue, proteoglycan 3 | NM_006093 | 2 |
Leukocyte associated Ig like receptor 1 | NM_021706 | 1 |
Eosinophil peroxidase (EPO) | X14346 | 3 |
Cell structural genes | ||
Tubulin β | BC001002, AB062393 | 2 |
Actin β | BC004251 | 1 |
Actin γ1 | BC039144 | 1 |
Enzymes | ||
Acylphosphatase 2 | BC012290 | 1 |
Aldolase A | BC010660 | 1 |
Aminolevulinate δ synthase 1 | BC011798 | 1 |
Asparagine-linked glycosylation 8 homologue | BC001133 | 1 |
ATP-ase lyzosomal accessory protein 1 | BC000724 | 1 |
Carnithine O-octanoyl transpherase | BC051874 | 1 |
Cyclin dependent kinase regulatory subunit 2 | BC006458 | 1 |
Diacylglycerol kinase zeta | AK123378 | 1 |
Disulfide isomerase | AY358646 | 1 |
Enolase 1 | NM_080738, NM_001428 | 2 |
Esterase D | AF112219 | 1 |
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 | NM_001356 | 1 |
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 | BC016060 | 1 |
Flap structure specific endonuclease 1 | NM_004111 | 1 |
Glia maturation factor γ | BC032819 | 1 |
Glucosaminyl transferase 1 | NM_001490 | 1 |
Glutathione-S-transpherase zeta | BC001453 | 1 |
IMP hydrolase | BC008879 | 1 |
KRIT 1 | AF388384 | 1 |
Lactate dehydrogenase B | BC002362 | 1 |
Methylthioadenosine phosphorylase | BC026106 | 1 |
NADH dehydrogenase 1 α subcomplex 9 | BC009311 | 1 |
Ornithine decarboxylase 1 | NM_002539 | 1 |
Phosphatidic acid phosphatase type 2A | BC039847 | 1 |
Phosphoantothenate cysteine ligase | BC062586 | 1 |
Phosphoribosylaminoimidazole carboxylase | BC010273 | 1 |
PI-3 kinase related kinase SMG-1 | BC061522 | 1 |
Prolyl 4-hydroxylase α subunit | M24487 | 1 |
Protin kinase, DNA activated, catalytic polypep. | NM_006904 | 1 |
SP25 | D14658 | 1 |
Transketolase | BC024926 | 1 |
Translation initiator factor 2α kinase 3 | NM_004836 | 1 |
Triosephosphatase isomerase 1 | BC009329 | 1 |
Genes of the immune system | ||
MHC-1, HLA-Bw62 | M28204 | 1 |
CD74 | NM_004355 | 1 |
β2−microglobulin | BC032589 | 1 |
Translationally controlled tumor protein 1 | BC052333 | 3 |
Proteosome activator subunit 3 | NM_005789 | 1 |
T1A1 cytotoxic granule associated RNA binding protein | NM_022173 | 1 |
Oxidation resistance 1 | BC032710 | 1 |
Peroxiredoxin 2 | BC000452 | 1 |
Genes involved in lipid metabolism | ||
Oxysterol binding protein | NM_002556 | 1 |
Genes involved in the protein translation machinery | ||
Ribosomal protein L3 | BC012786 | 1 |
Ribosomal protein L7 | NM_000971 | 1 |
Ribosomal protein L7a | NM_000972 | 2 |
Ribosomal protein L12 | NM_000976, BC050644 | 2 |
Ribosomal protein L13a | NM_012423 | 1 |
Ribosomal protein L15 | NM_002948 | 1 |
Ribosomal protein L18a | NM_000980 | 1 |
Ribosomal protein L23a | BC014459, BC058041 | 2 |
Ribosomal protein L26 | NM_000987 | 1 |
Ribosomal protein S3 | NM_001005 | 1 |
Ribosomal protein S8 | NM_001012 | 1 |
Ribosomal protein S10 | BC001032 | 1 |
Ribosomal protein S11 | BC007945 | 1 |
Ribosomal protein S16 | BC007977 | 1 |
Ribosomal protein S18 | NM_022551 | 1 |
Ribosomal protein S25 | NM_001028 | 1 |
Ribosomal protein S27 | BC002658 | 1 |
Ribosomal protein large P0 | NM_001002 | 1 |
Translation initiation factor 4A | BC012547 | 1 |
Translation elongation factor 1α1 | BC018641 | 3 |
Translation elongation factor 1β2 | NM_001959 | 1 |
Translation elongation factor 1γ | BC019051 | 1 |
RNA polymerase III | NM_007055 | 1 |
Growth and differentiation related proteins | ||
Cyclin B1 | NM_031966 | 1 |
Structural maintenance of chromosome 1 like 1 | NM_006306 | 1 |
Lectin galactoside binding, soluble 1 | BC020675 | 1 |
Regulatory proteins | ||
F-box only protein 9 | NM_033481 | 1 |
GM2 activator protein | X62078 | 1 |
Ion channels, sorting proteins and transporters | ||
Facilitated glucose transporter, member 6 | BC013740 | 1 |
Soluble carrier organic anion transporter member 3A1 | AF205074 | 1 |
Vacuolar protein sorting 29 | NM_016226 | 1 |
Sorting nexin 11 | NM_013323 | 1 |
B-cell receptor associated protein 31 | BC014323 | 1 |
Ferritin light polypeptide | BC004245 | 1 |
Chloride intracellular channel 1 | NM_001288 | 1 |
Epsin 4 | BC004467 | 1 |
Mitochondrial genes | ||
Mitochondrial ribosomal protein S15 | NM_031280 | 1 |
ATP-synthase, H+ transporter, mitochondrial F1 complex, β polypeptide | BC016512 | 1 |
Solute carrier family 25, member 5 | NM_001152 | 1 |
1 | ||
Proteins associated with cytoskeleton | ||
Thymosin β4, X-linked | NM_021109 | 3 |
Thymosin β10 | BC016731 | 1 |
Diaphanous homologue 1 | NM_005219 | 1 |
Cofilin 1 | BC012265 | 1 |
Transgelin 2 | BC009357 | 1 |
Restin | AF143235 | 1 |
Proteins involved with RNA | ||
RNA binding motif protein 3 | BC006825 | 1 |
RNA binding motif protein 6 | BC046643 | 1 |
Calcium homeostasis, ER protein | BC021294 | 1 |
Splicing factor prp8 | AF092565 | 1 |
Heterogeneous nuclear nucleoprotein A1 | NM_002136 | 1 |
Heterogeneous nuclear nucleoprotein C | BC003394 | 1 |
Cancer susceptibility candidate 3 | BC050526 | 1 |
Cleavage stimulation factor | M85085 | 1 |
Signal proteins | ||
Adenylate cyclase-associated protein 1 | BC013963 | 1 |
Membrane protein palmitoylated 1, 55 kDa | NM_002436 | 1 |
Guanine nucleotide binding protein | BC019093 | 1 |
Jagged 1 | NM_000214 | 1 |
Stress induced proteins and chaperones | ||
Heat shock protein 70 kDa protein 5 | BC020235 | 1 |
Heat shock protein 70 kDa protein 8 | BC008907, BC019816 | 3 |
GRP78 | AJ271729 | 1 |
T complex protein 1, δ subunit | AF026291 | 1 |
Cyclophilin B | BC032138 | 1 |
Transcription factors and other DNA binding proteins | ||
Zinc finger protein 9 | BC014911 | 1 |
Zinc finger protein 70 | NM_021916 | 1 |
Zinc finger protein 207 | BC000962 | 1 |
General transcription factor IIIC | BC060821 | 1 |
Transcription factor Dp-2 | BC013993 | 1 |
c-myc transcription factor | L16785 | 1 |
Hematopoietically expressed homeobox | NM_002729 | 1 |
High mobility group nucleosomal binding domain 2 | NM_005517 | 1 |
Hypothetical and other proteins | ||
Hypothetical protein MGC13204 | BC005106 | 1 |
Hypothetical protein MGC14156 | BC007876 | 1 |
Hypothetical protein MGC17943 | BC020522 | 1 |
Hypothetical protein MGC46719 | BC035727 | 1 |
Hypothetical protein DKFZP4341216 | BC054486 | 1 |
Hypothetical protein KIAA0556 | XM_044632 | 1 |
Hypothetical protein FLJ10719 | NM_018193 | 1 |
Hypothetical protein FLJ11171 | BC035005 | 1 |
Hypothetical protein LOC170371 | XM_378226 | 1 |
Hypothetical protein LOC389865 | XM_374329 | 1 |
Sushi domain containing | NM_022486 | 1 |
GPP34 realted protein | NM_018178 | 1 |
Ral-GDS related protein | NM_153615 | 1 |
Tetratricopeptiderepeat domain11 | BC009428 | 1 |
The sequences of the individual clones were screened against the BLASTn database.