Table 5.
Comparisons between full-length cDNA transcripts and assembled transcripts
|
6,137 fl-cDNA transcripts |
Trinity |
Trans-ABySS |
||||
|---|---|---|---|---|---|---|
| AFSFASSS | AFSF + ASSS | AF + SF + AS + SS | AFSFASSS | AFSF + ASSS | AF + SF + AS + SS | |
| % of fl-cDNA hit |
92.94% |
92.83% |
92.62% |
91.33% |
90.39% |
89.69% |
| (% of bases covered) |
82.84% |
82.64% |
81.68% |
79.52% |
76.71% |
74.09% |
| % of fl-cDNA hit with at least 90% of its length |
92.06% |
92.05% |
92.13% |
90.83% |
89.73% |
88.90% |
| (% of bases covered) | 82.08% | 82.02% | 81.14% | 79.24% | 76.40% | 73.79% |