Table 7.
Comparisons between public ESTs and assembled transcripts
| |
Trinity |
Trans-ABySS |
||||
|---|---|---|---|---|---|---|
| AFSFASSS | AFSF + ASSS | AF + SF + AS + SS | AFSFASSS | AFSF + ASSS | AF + SF + AS + SS | |
| % of ESTs hita |
87.83% |
88.89% |
88.86% |
88.64% |
87.91% |
87.29% |
| (% of bases covered) |
77.76% |
79.76% |
80.04% |
80.49% |
79.50% |
78.61% |
| % of assembled transcripts hitb |
59.54% |
65.43% |
69.82% |
78.05% |
80.58% |
80.78% |
| (% of bases covered) | 57.09% | 62.59% | 66.09% | 70.91% | 74.24% | 75.90% |
a Proportion of public ESTs matched by assembled transcripts.
b Proportion of assembled transcripts matched by public ESTs.