Table 8.
Statistic of transcripts aligned to the draft diploid Ae. tauschii genome
| |
Trinity |
Trans-ABySS |
Public ESTs |
Trinity_AFSFASSS_2nd |
||||
|---|---|---|---|---|---|---|---|---|
| AFSFASSS | AFSF + ASSS | AF + SF + AS + SS | AFSFASSS | AFSF + ASSS | AF + SF + AS + SS | |||
| Mean coverage |
1.9 |
2.2 |
2.3 |
2 |
2.1 |
2.1 |
11.0 |
2.9 |
| Coverage range |
1 - 279 |
1 - 339 |
1 - 254 |
1 - 26 |
1 - 24 |
1 - 24 |
1 - 10,122 |
1 - 658 |
| Bases covered | 62,103,048 | 58,923,609 | 56,105,411 | 51,499,767 | 45,678,989 | 41,571,199 | 46,506,263 | 63,042,809 |
Assembled transcripts were aligned to the draft genomic sequence. For the covered regions of the reference by assembled transcripts, mean coverage indicated how many transcripts covered on average for a certain region.