Table 2.
Analysis of UpaH variants found in different UPEC strains
| Origin of upaH (UPEC strain) | Size (bp) | Size (aa) | Predicted molecular mass (kDa) | No. of acidic amino acids | % acidic amino acids | No. of repeats predicted by RADAR | No. of repeatsa |
|---|---|---|---|---|---|---|---|
| CFT073 | 8,538 | 2,846 | 288 | 376 | 13.2 | 50 | 50 |
| M161 | 8,538 | 2,846 | 288 | 378 | 13.3 | 50 | 52 |
| M357 | 8,463 | 2,821 | 287 | 375 | 13.3 | 47 | 47 |
| M369 | 7,818 | 2,606 | 265 | 331 | 12.7 | 40 | 41 |
| IA2 | 7,581 | 2,527 | 258 | 323 | 12.8 | 36 | 37 |
a
Number of repeats present using the degenerative repeat motif (XGXXXXGXXAXXXXXGXXXXXX) based on the repeats identified in UpaHCFT073.