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. 2012 Nov 1;7(11):e48505. doi: 10.1371/journal.pone.0048505

Table 1. Comparison of the glycoside hydrolase (GH) profiles targeting plant structural polysaccharides in the snail, termite, giant panda, wallaby, and human metagenomes.

CAZy Family Known activity SNAIL TERMITE WALLABY PANDA HUMAN
Cellulases
GH5 cellulase 36 125 27 1 7
GH6 endoglucanase 4 0 0 0 0
GH7 endoglucanase 0 0 0 0 0
GH9 endoglucanase 15 43 5 0 0
GH44 endoglucanase 0 0 0 0 0
GH45 endoglucanase 0 6 0 0 0
GH48 endo-processive cellulases 2 0 0 0 0
Total 57 (2) 174 (16) 32 (4) 1 (0.5) 7 (1)
Endohemicellulases
GH8 endo-xylanases 46 21 2 1 2
GH10 endo-1,4-β-xylanase 25 102 19 1 2
GH11 xylanase 1 19 0 0 0
GH12 endoglucanase & xyloglucan hydrolysis 0 0 0 0 0
GH26 β-mannanase & xylanase 11 20 8 0 1
GH28 galacturonases 69 15 10 0 3
GH53 endo-1,4-β-galactanase 9 20 11 4 11
Total 161 (6) 197 (18) 50 (6) 6 (2.5) 19 (3)
Cell wall elongation
GH16 xyloglucanases & xyloglycosyltransferases 12 6 6 6 1
GH17 1,3-β-glucosidases 2 0 0 0 0
GH81 1,3-β-glucanase 1 0 0 0 0
Total 15 (1) 6 (1) 6 (1) 6 (3) 1 (0)
Debranching enzymes
GH51 α-L-arabinofuranosidase 22 13 19 2 15
GH62 α-L-arabinofuranosidase 2 0 0 0 0
GH67 α-glucuronidase 5 6 1 2 1
GH78 α-L-rhmnosidase 73 7 46 1 13
Total 102 (4) 26 (2) 66 (8) 5 (2) 29 (5)
Oligosaccharide-degrading enzymes
GH1 β-glucosidase & many other β-linked dimers 294 27 94 41 54
GH2 β-galactosidases & other β-linked dimer 66 32 39 4 29
GH3 mainly β-glucosidases 219 109 101 11 55
GH29 α-L-fucosidase 70 12 5 0 7
GH35 β-galactosidase 32 7 8 1 4
GH38 α-mannosidase 18 18 3 8 6
GH39 β-xylosidase 6 13 3 8 2
GH42 β-galactosidase 54 33 17 7 15
GH43 arabinases & xylosidases 185 63 72 13 34
GH52 β-xylosidase 0 3 0 0 0
Total 944 (36) 317 (28) 342 (39) 93 (41) 206 (36)

Data are presented with the GHs grouped according to their major function roles in the degradation of plant fiber, as classified in Allgaier et al., 2010 [70]. The numbers in parentheses represent the percentages of these groups relative to the total number of GHs identified in the metagenomic datasets [2590 for snail, 872 for wallaby, 1117 for termite, 227 for panda (from 3 samples), and for human (from 2 samples)].