Table 2. List of Top ranked significant associations between mRNA and variants (P<0.001).

mRNAs	SNPs-ID	P –value*	r2	mRNAs	SNPs-ID	P –value*	r2
HS.571028	rs2072590	0	0.16	ARL1	rs1516982	3.00E−04	0.10
LRRC41	rs2072590	0	0.16	HS.340072	rs1516982	3.00E−04	0.10
APIP	rs2665390	0	0.13	DOCK11	rs2072590	4.00E−04	0.12
ARL1	rs10088218	0	0.13	CISD2	rs2665390	4.00E−04	0.10
ENG	rs10088218	0	0.11	KCNMB1	rs10088218	4.00E−04	0.12
FLJ21438	rs10088218	0	0.10	PIK3C2B	rs10088218	4.00E−04	0.10
TMTC4	rs10088218	0	0.12	CD226	rs10098821	4.00E−04	0.10
GEMIN4	rs10098821	0	0.13	HIP1	rs10098821	4.00E−04	0.10
IER3	rs10098821	0	0.13	MCM7	rs10098821	4.00E−04	0.10
VGF	rs10098821	0	0.13	RALGPS2	rs10098821	4.00E−04	0.10
VGF	rs10088218	1.00E−04	0.12	ELMO1	rs2363956	5.00E−04	0.12
PLEKHA7	rs10098821	1.00E−04	0.12	EHMT1	rs10098821	5.00E−04	0.10
ZHX2	rs10098821	1.00E−04	0.12	IL32	rs10098821	5.00E−04	0.10
CCL4L1	rs1516982	1.00E−04	0.14	KCNMB1	rs10098821	5.00E−04	0.11
GEMIN4	rs1516982	1.00E−04	0.10	RIC8A	rs10098821	5.00E−04	0.11
VGF	rs1516982	1.00E−04	0.13	RNF44	rs10098821	5.00E−04	0.10
PI4K2A	rs2363956	2.00E−04	0.13	ODF1	rs1516982	5.00E−04	0.10
HS.572064	rs2072590	2.00E−04	0.13	TRPC1	rs2363956	6.00E−04	0.12
CCL4L1	rs10088218	2.00E−04	0.11	MFGE8	rs10098821	6.00E−04	0.10
BSDC1	rs10098821	2.00E−04	0.11	APOBEC3H	rs2072590	7.00E−04	0.10
GART	rs10098821	2.00E−04	0.11	EDEM1	rs2072590	7.00E−04	0.11
HS.340072	rs10098821	2.00E−04	0.12	HS.579631	rs2665390	7.00E−04	0.10
MAPKAP1	rs10098821	2.00E−04	0.11	NASP	rs10098821	7.00E−04	0.10
RGL1	rs1516982	2.00E−04	0.10	MT1G	rs3814113	7.00E−04	0.15
OPTN	rs10088218	3.00E−04	0.10	DAP3	rs2665390	8.00E−04	0.10
ZHX2	rs10088218	3.00E−04	0.10	FANCE	rs1516982	8.00E−04	0.10
CAV1	rs10098821	3.00E−04	0.11	GSTP1	rs1516982	8.00E−04	0.13
RGL1	rs10098821	3.00E−04	0.11	HS.340072	rs10088218	9.00E−04	0.10
STC2	rs10098821	3.00E−04	0.10	KRT17	rs10098821	9.00E−04	0.10
TBXAS1	rs10098821	3.00E−04	0.10	ATL2	rs3814113	9.00E−04	0.11

^*Permutated P value.