Table 1.
Raw data | |
---|---|
Total number of reads |
71878419 |
Number of unique high-quality reads |
13300000 |
Number of contigs obtained with Velvet/Oases/STM- |
22363 |
Unigenes dataset |
|
Unigenes number |
10338 |
Total size (bp) |
1787600 |
Largest transcript length (bp) |
1314 |
N50 length (bp) |
168 |
No ATGC characters |
18 |
Average coverage per base |
62 |
Predicted proteins |
|
Predicted CDS (partial/complete) |
4472 |
Gene expression |
|
Reads mapped in transcripts |
71148200 |
Most expressed transcript (rpkm) | 68250 |
bp: base pair; rpkm: read coverage normalized per million mapped nucleotides and the length of unigene.