TABLE 3.

Allelic polymorphisms in the six virulence gene fragments analyzed

Gene	Size (bp) of fragments analyzed	Coverage of complete CDS (%)	Allelic location (nt) in strain EGDb	No. of alleles	No. of polymorphic sites	% of polymorphic sites	Avg G+C content (%)	D.I.	dN/dS
prfA	469	65.69	203701-204169	10	33	7.036	34.31	0.804	0.000
inlB	433	22.87	457985-458417	19	47	10.855	40.28	0.966	0.082
dal	455	41.10	925132-925586	13	85	18.681	40.26	0.899	0.054
lisR	448	65.79	1402760-1403207	10	54	12.054	39.11	0.823	0.000
inlC	418	46.91	1860499-1860916	17	36	8.612	31.65	0.944	0.098
clpP	419	70.18	2542071-2542489	16	39	9.308	39.80	0.902	0.023
Total	2642	39.35	NAa	28	294	11.128	37.57	1.000	NA

^aNA, not applicable.

^bnt, nucleotide.