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. Author manuscript; available in PMC: 2013 May 1.
Published in final edited form as: Neuroimage. 2012 Jul 14;63(2):800–811. doi: 10.1016/j.neuroimage.2012.07.014

Table 1.

Structure Vertes IL Brain 17 IL Subtraction IL Vertes PL Brain 17 PL Subtraction PL
Telencephalon
 Cortex
  Cingulate +++ ✓+ +++
  Ectorhinal + -- -- -- --
  Entorhinal ++ ++ --
  Frontal
   Medial +++ ✓+ +++
   Lateral -- - - -- - -
  Infralimbic +++ +++
  Insular
   Agranular + +++
   Dysgranular ++ +++ --
   Granular + -- -- -- --
  Lateral Agranular (Motor) -- -- -- -- -- --
  Medial Agranular (Motor) + ✓+ +
  Occipital -- -- -- -- -- --
  Orbital
   Lateral + +
   Medial +++ ✓+ +++
   Ventral + +
   Ventrolateral + +
  Perirhinal + ++
  Piriform
   Anterior -- +
   Posterior ++ --
  Prelimbic +++ +++
  Retrosplenial + +
  Somatosensory I -- -- -- -- --
  Somatosensory II -- -- -- -- --
  Temporal -- -- -- -- -- --
  Nucleus Accumbens
   Shell + ✓+ +++
   Core + +++ ✓+
  Amygdala
   Anterior ++ ✓+ -- --
   Basolateral + ✓+ +++
   Basomedial +++ ✓+ +
   Central +++ ✓+ +++
   Cortical ++ --
   Medial +++ ✓+ --
   Lateral + ✓+ +
   Posterior + --
  Anterior Olfactory Nucleus +++ +++ ✓+
  Bed Nucleus of the Stria Terminalis +++ --
  Caudate-Putamen ++ ++
  Claustrum -- +++ --
  Diagonal Band Nucleus
   Horizontal +++ ✓+ +
   Vertical ++ -- --
  Endopiriform Nucleus ++ ✓+ -- --
  Globus Pallidus -- -- -- -- ✓+
  Hippocampus
   Ammon’s Horn -- -- ✓+ -- --
   Dentate Gyrus -- -- ✓+ -- --
   Subiculum -- -- ✓+ -- --
  Lateral Septum
   Dorsal Nucleus ++ ✓+ --
   Intermediate Nucleus + ✓+ --
   Ventral Nucleus +++ ✓+ +
  Lateral Preoptic Area +++ ✓+ +
  Magnocellular Preoptic Area + ✓+ +
  Medial Preoptic Area +++ ✓+ +
  Median Preoptic Nucleus ++ --
  Medial Septal Nucleus + -- -- --
  Olfactory Tubercle ++ +++ ✓+
  Septofimbrial Nucleus -- ✓+ --
  Septohippocampal Nucleus ++ ✓+ --
  Substantia Innominata +++ ✓+ +
  Tania Tecta
   Dorsal ++ ✓+ ++
   Ventral + -- --
  Ventral Pallidum + -- --
Concordance to Vertes =53/57 (0.93) = 47/57 (0.825) =44/57 (0.772) =44/57 (0.772)
Diencephalon
 Thalamus
  Anterodorsal Nucleus -- -- -- -- -- --
  Anteromedial Nucleus + ++ ✓+
  Anteroventral Nucleus -- -- -- --
  Central Lateral Nucleus -- -- -- + -- --
  Central Medial Nucleus ++ -- -- ++ -- --
  Interanteromedial Nucleus ++ -- -- +++ -- --
  Intermediodorsal Nucleus +++ -- +++ -- ✓+
  Lateral Geniculate Nucleus -- --
  Lateral Habenula + +
  Laterodorsal Nucleus + +
  Lateroposterior Nucleus + - + -
  Medial Geniculate Nucleus -- -- -- --
  Medial Habenula -- -- -- -- --
  Mediodorsal Nucleus ++ -- +++ -- --
  Paracentral Nucleus -- -- -- -- -- --
  Parafasicicular Nucleus + -- -- -+ -- --
  Paratential Nucleus +++ +++
  Paraventricular Nucleus +++ -- -- +++ -- --
  Posterior Nucleus -- -- -- -- --
  Reticular Nucleus -- --
  Reuniens Nucleus +++ ✓+ +++
  Rhomboid Nucleus ++ -- + ✓+
  Submedial Nucleus -- -- -- -- -- --
  Ventral Anterior-lateral Nucleus -- -- -- --
  Ventral Basal Complex -- --
Concordance to Vertes = 12/24 (0.50) = 14/24 (0.583) = 12/24 (0.50) = 13/24 (0.54)
 Hypothalamus
  Anterior Nucleus ++ ✓+ -- --
  Dorsal Hypothalamic Area ++ +
  Dorsomedial Nucleus +++ ✓+ + --
  Lateral Nucleus +++ ✓+ ++
  Mammillary Bodies + -- -- -- -- --
  Paraventricular Nucleus -- -- -- -- -- --
  Perifornical Area +++ -- -- ++ -- --
  Posterior Nucleus +++ -- -- + -- --
  Premammillary Nucleus + -- -- -- -- --
  Supramammillary Nucleus ++ -- -- ++ -- --
  Ventromedial Nucleus -- -- -- -- --
Concordance to Vertes = 5/10 (0.50) = 5/10 (0.50) =5/9 (0.555) = 5/9 (0.555)
 Subthalamus
 Fields of Forel + -- -- -- -- --
 Zona Incerta + -- -- -- --
= 0/2 (0.00) = ½ (0.5) = 2/2 (1.00) = 2/2 (1.00)
 Brain Stem
  Anterior Pretectal Nucleus -- -- -- -- -- --
  Barrington’s Nucleus + -- -- + -- --
  Cuneiform Nucleus -- -- -- + -- --
  Dorsal Motor Nucleus (Vagus) + -- -- -- -- --
  Dorsal Raphe Nucleus + -- +++ --
  Dorsal Tegmental Nucleus -- -- -- -- -- --
  Interpeduncular Nucleus ++ -- + --
  Laterodorsal Tegmental Nucleus + -- -- + -- --
  Locus Coeruleus + -- -- -- -- --
  Mesencephalic Reticular + -- -- + -- --
  Formation
  Nucl+eus Ambiguus -- -- -- -- -- --
  Nucleus Incertus + -- -- ++ -- --
  Nucleus Gigantocellularis -- -- -- + -- --
  Nucleus Pons -- -- -- --
  Nucleus Pontis Caudalis -- -- -- -- -- --
  Nucleus Pontis Oralis -- -- -- -- --
  Nucleus Solitary Tract + -- -- -- -- --
  Parabrachial Nucleus ++ -- -- --
  Pedunculopontine Tegmental ++ -- -- + -- --
  Nucleus
  Periaquaductal Gray Matter + -- -- +++ -- --
  Peripeduncular Nucleus +++ -- -- + -- --
  Reticular Tegmental Nucleus + -- -- --
  Retrorubral Areas -- -- -- + -- --
  Rostro-ventrolateral Medulla -- -- -- -- -- --
  Surpalemniscal Nucleus -- ++ -- --
  Superior Colliculus -- -- -- -- -- --
  Ventral Tegmental Area ++ ++ --
  Ventral Tegmental Nucleus -- -- -- -- -- --
  Concordance with Vertes = 16/27 (0.592) = 13/27 (0.481) = 13/27 (0.481) = 14/27 (0.519)
  Total Concordance = 86/120 (0.717) = 80/120 (0.667) = 76/119 (0.639) = 78/119 (0.655)
  True Detect 55 56 40 39
  True No Detect 31 24 36 39
  False Detect 7 14 19 16
  False No Detect 27 26 24 25
  TD/(TD+FD) =55/62 (0.890) =56/70 (0.80) =40/59 (0.678) = 39/55 (0.709)
  TND/(TND+FND) =31/58 (0.534) =24/50 (0.480) = 36/60 (0.60) = 39/64 (0.609)

Key To Table

Vertes: +++ robust

Vertes: ++ strong

Vertes: + Weak

Vertes: −None

Probtrack: ✓✓voxel of probtrack present in that area

Probtrack: ✓+ voxel of probtrack present in that area (but so is the other seed, but this area shows more voxels than other area)

Probtrack: −No voxels in that area