Table 2.
Nucleotide sequence of PCR primers used for the construction of FMDV O/HN/CHA/93 full-length cDNA clone
Name | Nucleotide Sequence (5′ → 3′) | Nucleotide Position (nt) |
---|---|---|
Z1 |
AGACTAGTtaatacgactcactataT7promoterGGGTTG |
1–20 |
AAAGGGGGCGCTAGGGT |
|
|
Z1′ |
GAGGAGGGGGGGGGGGGGGGTGAAAG |
363–388 |
Z2 |
CTTTCACCCCCCCCCCCCCCCTCCTC |
363–388 |
Z2′ |
GAAGCAACAGTGCTGCTACT |
721–740 |
Z3 |
CGCGCCGTCGCTTGAGGAAG |
560–579 |
Z3′ |
GGGTCGGAGCTCCTCCTTGATAGA |
5433–5456 |
Z4 |
AGCCACCTCTTCAGAACGTCTACC |
5242–5265 |
Z4′ |
ACGCGGCCGCTTTTTTTTTTTTTTTTTTTTT |
3′ end |
Ztu1 |
GGAGAGCGAGTCAGATATCTTCTTCACTACA |
4221–4251 |
Ztu1′ |
TGTAGTGAAGAAGATATCTGACTCGCTCTCC |
4221–4251 |
Ztu2 |
GAAAACGCCTGAGGCCGCCGCACACTGCATT |
2967–2997 |
Ztu2′ | AATGCAGTGTGCGGCGGCCTCAGGCGTTTTC | 2967–2997 |
Restriction enzyme sites introduced during clone construction are boxed. Mutated nucleotides are underlined and in bold.