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. 2012 May 16;8:57. doi: 10.1186/1746-6148-8-57

Table 2.

Nucleotide sequence of PCR primers used for the construction of FMDV O/HN/CHA/93 full-length cDNA clone

Name Nucleotide Sequence (5′ → 3′) Nucleotide Position (nt)
Z1
AGACTAGTtaatacgactcactataT7promoterGGGTTG
1–20
AAAGGGGGCGCTAGGGT
 
Z1′
GAGGAGGGGGGGGGGGGGGGTGAAAG
363–388
Z2
CTTTCACCCCCCCCCCCCCCCTCCTC
363–388
Z2′
GAAGCAACAGTGCTGCTACT
721–740
Z3
CGCGCCGTCGCTTGAGGAAG
560–579
Z3′
GGGTCGGAGCTCCTCCTTGATAGA
5433–5456
Z4
AGCCACCTCTTCAGAACGTCTACC
5242–5265
Z4′
ACGCGGCCGCTTTTTTTTTTTTTTTTTTTTT
3′ end
Ztu1
GGAGAGCGAGTCAGATATCTTCTTCACTACA
4221–4251
Ztu1′
TGTAGTGAAGAAGATATCTGACTCGCTCTCC
4221–4251
Ztu2
GAAAACGCCTGAGGCCGCCGCACACTGCATT
2967–2997
Ztu2′ AATGCAGTGTGCGGCGGCCTCAGGCGTTTTC 2967–2997

Restriction enzyme sites introduced during clone construction are boxed. Mutated nucleotides are underlined and in bold.