Table 4. Association Between Haplotypes of SLC23A1 and SLC23A2 and Advanced Colorectal Adenomaa.
Haplotype | SNPs | Exact P Value b |
---|---|---|
SLC23A1c | ||
Block 1 | SLC23A1-18, -05, -09, and -21 | 0.92 |
SLC23A2c | ||
Region 1a | SLC23A2-31, -32, 08, -09, and -10 | 0.71 |
Region 1b | SLC23A2-08, -09, and -10 | 0.67 |
Region 2a | SLC23A2-33, -26, and -03 | 0.43 |
Region 2b | SLC23A2-33 and -26 | 0.46 |
Region 3 | SLC23A2-05 and -01 | 0.12 |
Abbreviations are as follows: SLC23A1, solute carrier family 23 (nucleobase transporters), member 1; SLC23A2, SLC23A member 2; SNP, single nucleotide polymorphism.
Global test for association between haplotypes and colorectal adenoma.
In SLC23A1, analysis by block structure as defined by Gabriel et al. (29). In SLC23A2, no haplotype blocks as defined by Gabriel et al. were identified. A sliding window of regions displaying high degree of linkage disequilibrium were utilized for exploratory analyses.