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. Author manuscript; available in PMC: 2012 Nov 6.
Published in final edited form as: Yeast. 2009 Oct;26(10):531–544. doi: 10.1002/yea.1703

Table 6A.

Spermidine repressed genes involved in DNA, RNA binding and regulation of gene expression, splicing±

Gene names Annoted functions Fold change
MBF1 Transcriptional coactivator that bridges the DNA-binding region of Gcn4p and TATA-binding protein Spt15p, frameshift suppressor −3.1
GIS1 JmjC domain-containing histone demethylase, transcription factor involved in the expression of genes during nutrient limitation −2.1
HTL1 Component of the RSC chromatin remodeling complex, may function in chromosome stability, telomerase maintenance −1.9
RAD51 Strand exchange protein, forms a helical filament with DNA that search for homology, involved in double-strand DNA break repair −1.8
MIG2 Protein with zinc fingers, involved in repression of SUC2, multicopy inhibition of GAL gene expression −1.8
RPA135 RNA polymerase I subunit A135, DNA directed RNA polymerase act −1.6
ARP8 Nuclear actin-related protein involved in chromatin-remodeling enzyme complexes −1.9
SNF11 Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation −1.7
RSA1 Protein involved in the assembly of 60S ribosomal subunits −1.7
GAT2 Protein containing GATA family zinc-finger motifs, expression repressed by leucine −1.9
SNT309 Component of NineTeen complex, involved in RNA splicing −2
STP4 Protein containg a Kruppel-type zinc-finger domain −2.4
MED7 Subunit of the RNA polymerase II mediator complex, essential for transcriptional regulation −2.1
CIN5 Basic leucine zipper transcriptional factor of yAP-1 family, involed in drug resistance and salt tolerance −2.4
TOF2 Topoisomerase I-interacting factor, may be involved in DNA topological changes −1.8
SUT1 Transcription factor of the zinc family, involved in induction of hypoxic gene expression −2
ECM2 Pre-mRNA splicing factor −1.8
NPL3 RNA-binding protein, carries poly(A)+ mRNA from nucleus into the cytoplasm, phosphorylated by Sky1p −1.8