Figure 6.

Venn diagram showing the overlap of contigs containing SPPs among the three SPP identification methods. A Venn diagram of the three SPP identification methods shows the overlap of contigs containing SPPs between each method. The two pair-wise comparison methods had the largest overlap of identified contigs. MSA – pairwise comparison using a modified version of the algorithm described by Borevitz et al.[1]. SFPdev – pairwise comparison using a modified version of the algorithm described by West et al.[5]. RIL - massively parallel approach looking at the distribution of SPP calls for all individuals in a diversity panel