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. 2012 Nov 6;7(11):e48464. doi: 10.1371/journal.pone.0048464

Table 3. Genetic based estimates of effective population size Inline graphic (MBT, TM3) and Inline graphic(LDNe, ONeSAMP) and comparison with the demographic estimates of the inbreeding effective number of breeders Inline graphic for four populations of O. reticulata.

Frag Ref Year Inline graphic MBT TM3 LDNe ONeSAMP
ORF1 170 1990 58 243 (52 - ∞) 64 (30–242) 55 (31–156) 37 (32–50)
ORF1 170 2000 65 34 (21–73) 37 (32–56)
ORF3 s84 1990 –** 45 (17- 364) 26 (13–74) 16 (10–25) 25 (21–35)
ORF3 s84 2000 1 14 (7–30) 24 (20–35)
ORF7 168 1990 12 27 (13–64) 17 (10–33) 20 (14–30) 27 (24–31)
ORF7 168 2000 58 25 (17–40) 27 (25–32)
ORF8 175 1990 21 132 (37– ∞) 104 (19–999*) 118 (44– ∞) 48 (37–81)
ORF8 175 2000 48 37 (22–80) 45 (35–68)

MBT: moment based temporal method; TM3: likelihood based temporal method. LDNe: the linkage disequilibrium method with bias correction; ONeSAMP is a program that uses summary statistics and approximate Bayesian computation. Lower and upper 95% confidence intervals are in brackets. *: TM3 did not produce upper confidence intervals below the imposed boundary of 999 individuals. **: no estimate possible due to too few of offspring.