Table III.

Pairwise energies for RCs in the toy example. Pruning of RC i_r using i_t will be attempted, with pruning zone Z = {i, j}.

			Pairwise energies
Residue conformation	Perturbation parameter value	Intra-energy	js	js′ ku′	ku
ir	0	2	−2	∞ 5	0
it	1	0	∞	−3 5	−5
js	0	−2	20		3
js′	1	0	2		3
ku	n/a	1
ku′	n/a	1