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. 2012 Sep 11;12:199. doi: 10.1186/1471-2180-12-199

Figure 1.

Figure 1

Phylogenetic tree comparing 21 TyrDC sequences from various Lactobacillus strains. The amino acid sequences were aligned using the multiple alignment program CLUSTAL W2. The phylogenetic tree was constructed by using the TreeTop from the GeneBee. Bootstrap values are expressed in percentages and indicated at nodes. The amino acid sequences of TyrDC were obtained from the following accession numbers entries: [GenBank : AF446085] (L. brevis IOEB 9809), [GenBank : YP_796294.1] (L. brevis ATCC 367), [GenBank : ABY71221.1] (L. brevis NS77), [GenBank : ZP_03940842.1] (L. brevis subsp. gravesensis ATCC 27305), [GenBank :AEB91325.1] (Sporolactobacillus sp. P3J), [GenBank : AAQ73505.1] (E. hirae), [GenBank : ZP_05553037] (L. coleohominis 101-4-CHN), [GenBank : ZP_07729457] (L. oris PBo13-T2-3), [GenBank :ZP_06679761] (E. faecium E1071), [GenBank : ZP_06677337] (E. faecium E1162), [GenBank : ZP_00602894.1] (E. faecium DO), [GenBank : ZP_06698865.1] (E. faecium E1679), [GenBank : CAF33980] (E. durans IPLA 655), [GenBank : ZP_05559869] (E. faecalis T8), [GenBank : ZP_07768147] (E. faecalis DAPTO 516), [GenBank : ZP_07771864] (E. faecalis TX0102), [GenBank : ZP_07569615] (E. faecalis TX0109), [GenBank : CBL32775] (Enterococcus sp. 7 L76), [GenBank : ADX79254] (E. faecalis 62) and [GenBank : ZP_04646316] (E. faecalis TUSoD Ef11).