Table 3. Identification of homologues among fungal Cyt b gene introns1.
Homologue | Intron number | Intron position | Intron name | ||||||||||
1 | 9 | 69,67 | Ad | Bf1 | Mfc1 | Mfg1 | Ml1 | Mm1 | My1 | Pa1 | Uv1 | ||
2 | 2 | 97 | Mmj1 | Mn1 | |||||||||
3 | 10 | 114,131 | Hj1 | Cb | Gz2 | Mfc2 | Mfg4 | Ml2 | Mm2 | My2 | Pm | Uv2 | |
4 | 2 | 126 | Aj1 | Pt2 | |||||||||
5 | 8 | 131 | Bf2 | Ef | Mmj2 | Mn2 | Nc1 | Pa2 | Pt3 | Ptr1 | |||
6 | 2 | 131 | Cp1 | Cm | |||||||||
7 | 2 | 137 | Ci | Cs | |||||||||
8 | 2 | 139 | Sc1 | Sd2 | |||||||||
9 | 3 | 143 | Ml3 | Mm3 | My3 | ||||||||
10 | 4 | 143 | Bc | Co | Cp2 | Mfn2 | |||||||
11 | 6 | 164 | Gz3 | Ml4 | Bf4 | Mfg5 | Nc2 | Uv3 | |||||
12 | 2 | 164 | My4 | Mm4 | |||||||||
13 | 4 | 164 | Gp1 | Ta | Tad1 | To | |||||||
14 | 11 | 168,169,208 | Ac | Pn | Ab | Gz4 | Mfc5 | Mfg6 | Ml5 | Mm5 | My5 | Nf | Hj2 |
15 | 4 | 169 | Gp2 | Tad2 | Ti | Tik | |||||||
16 | 2 | 169 | Sc3 | Sd4 | |||||||||
17 | 6 | 260 | Gz5 | Mfg7 | Mfc6 | My6 | Mm6 | Ml6 | |||||
18 | 3 | 275 | Pa3 | Pc | Uv6 | ||||||||
19 | 2 | 275 | Ml7 | My7 |
the homology of Cyt b introns was identified by using the reciprocal BLAST to calculate the pairwise identity of introns with the cut off 1e-5. Two introns were considered as homologues if coverage >30% and pairwise identity >80%.