Table 3.
Validation scores for 20 most significant clusters identified by Ensemble NMF on Collins data, based on SGD complexes
| SGD complex | Precision | Recall |
|---|---|---|
| Histone deacetylase complex | 1.00 | 0.24 |
| Vesicle coat | 1.00 | 0.28 |
| COPI vesicle coat | 1.00 | 1.00 |
| Ribonucleoprotein complex | 1.00 | 0.06 |
| Small nuclear ribonucleoprotein complex | 1.00 | 0.42 |
| Histone acetyltransferase complex | 1.00 | 0.46 |
| Preribosome | 1.00 | 0.18 |
| 90S preribosome | 1.00 | 0.21 |
| SAGA complex | 1.00 | 0.90 |
| Transcription factor TFIIIC complex | 1.00 | 1.00 |
| Exocyst | 1.00 | 1.00 |
| Ubiquitin ligase complex | 1.00 | 0.25 |
| U4 | 1.00 | 0.82 |
| COMPASS complex | 1.00 | 1.00 |
| Septin complex | 1.00 | 1.00 |
| DNA replication preinitiation complex | 1.00 | 0.50 |
| V-ATPase V1 domain | 1.00 | 0.88 |
| Small subunit processome | 1.00 | 0.27 |
| Rpd3L complex | 1.00 | 0.91 |
| Pre-replicative complex | 1.00 | 0.67 |