Table 4. Differentially expressed protein spots found in 5-azaC and drought treated samples.
Spot I.D | MSUv7 ID | MSU Gene Product Name | Fold change* | Cluster | Coverage | Mascot score | |||
C | DS | A | ADS | ||||||
C-17 | LOC_Os03g38840 | retrotransposon, putative, centromere-specific | 2.86 | - | 40.20% | 43.9 | |||
C-19 | LOC_Os04g16830 | DNA-directed RNA polymerase subunit beta, putative | 9 | - | 18.70% | 53.9 | |||
C-212 | LOC_Os07g22720 | 2-oxo acid dehydrogenases acyltransferase domain containing protein | 4.2 | - | 13.20% | 84.2 | |||
C-220 | LOC_Os08g38210 | transcription factor BIM2, putative | 3.14 | EU | 10.40% | 64 | |||
C-241 | LOC_Os08g19680 | expressed protein | 3.3 | - | 52.90% | 45.6 | |||
C-260 | LOC_Os03g40830 | OsSub30 - Putative Subtilisin homologue, expressed | 4.8 | ED | 6.00% | 71 | |||
C-266 | LOC_Os08g39840 | lipoxygenase, chloroplast precursor, putative, expressed | 3.91 | EU | 43.90% | 48.3 | |||
C-615 | LOC_Os10g35412 | retrotransposon protein, putative, unclassified, expressed | 3.03 | - | 10.70% | 58.3 | |||
C-99 | LOC_Os09g32670 | UDP-glucuronate 4-epimerase, putative | 4.25 | - | 21.00% | 58.6 | |||
DS-107 | LOC_Os10g21190 | expressed protein | 4.9 | - | 73.00% | 60.5 | |||
DS-109 | LOC_Os11g15570 | Ser/Thr protein phosphatase family protein, putative | 4.55 | NED | 11.20% | 64 | |||
DS-14 | LOC_Os03g39010 | possible lysine decarboxylase domain containing protein, expressed | 34.72 | - | 25.40% | 68.6 | |||
DS-187 | LOC_Os11g10480 | dehydrogenase, putative | 5.15 | EU | 13.70% | 62.5 | |||
DS-19 | LOC_Os03g10510 | outer mitochondrial membrane porin, putative | 2.41 | ED | 18.60% | 66.7 | |||
DS-206 | LOC_Os01g07120 | AP2 domain containing protein, expressed | 3.26 | EU | 14.90% | 51.4 | |||
DS-278 | LOC_Os03g07700 | expressed protein | 3.05 | NEU | 10.40% | 65 | |||
DS-32 | LOC_Os08g41620 | ubiquitin carboxyl-terminal hydrolase family protein, expressed | 5.37 | - | 36.50% | 72 | |||
DS-36 | LOC_Os09g25270 | hypothetical protein | 5.62 | - | 22.30% | 71.5 | |||
DS-41 | LOC_Os12g37400 | MCM7 - Putative minichromosome maintenance MCM complex subunit 7 | 5.6 | NED | 41.30% | 51 | |||
DS-64 | LOC_Os12g39830 | cyclin, putative | 5.05 | ED | 23.60% | 107 | |||
DS-81 | LOC_Os02g41800 | auxin response factor, putative | 5.55 | - | 16.30% | 99.3 | |||
A-108 | LOC_Os08g39150 | expressed protein | 4.55 | EU | 14.50% | 70 | |||
A-133 | LOC_Os01g31220 | expressed protein | 5.91 | - | 14.20% | 77.9 | |||
A-164 | LOC_Os03g62290 | expressed protein | 6.36 | - | 30.90% | 66 | |||
A-21 | LOC_Os01g48874 | wax synthase, putative | 22.85 | ED | 18.70% | 65 | |||
A-23 | LOC_Os03g06540 | retrotransposon protein, putative, unclassified, expressed | 6.33 | - | 18.40% | 62.2 | |||
A-234 | LOC_Os09g04440 | DNA-binding protein, putative | 6.33 | ED | 13.20% | 67 | |||
A-516 | LOC_Os04g38810 | formin, putative, expressed | 2.04 | ED | 6.20% | 71 | |||
A-676 | LOC_Os12g10670 | AAA-type ATPase family protein, putative | 4.8 | NED | 26.20% | 42.8 | |||
A-730 | LOC_Os12g13780 | retrotransposon protein, putative, Ty1-copia subclass, expressed | 3.27 | - | 41.30% | 56.3 | |||
A-93 | LOC_Os11g09070 | expressed protein | 2.5 | - | 17.80% | 60.6 | |||
ADS-144 | LOC_Os04g44224 | brain acid soluble protein 1, putative | 3.93 | - | 29.40% | 65 | |||
ADS-188 | LOC_Os09g37670 | expressed protein | 2.21 | - | 56.00% | 53.9 | |||
ADS-198 | LOC_Os10g33800 | lactate/malate dehydrogenase, putative | 38.94 | ED | 28.30% | 77.9 | |||
ADS-20 | LOC_Os01g36600 | PPR repeat domain containing protein, putative | 6.86 | ED | 76.20% | 47.9 | |||
ADS-212 | LOC_Os04g40950 | glyceraldehyde-3-phosphate dehydrogenase, putative | 2.37 | - | 33.50% | 131 | |||
ADS-292 | LOC_Os07g14270 | calreticulin precursor protein, putative | 2.25 | ED | 33.50% | 123 | |||
ADS-373 | LOC_Os11g47760 | DnaK family protein, putative | 5.26 | EU | 13.70% | 131 | |||
ADS-393 | LOC_Os01g66730 | exosome complex exonuclease RRP40, putative | 9.51 | - | 23.40% | 82 | |||
ADS-484 | LOC_Os02g45950 | expressed protein | 30.82 | - | 15.70% | 87 | |||
ADS-503 | LOC_Os10g21268 | ribulose bisphosphate carboxylase large chain precursor, putative | 7.87 | 25.21 | - | 36.60% | 179 | ||
ADS-546 | LOC_Os03g08170 | protein kinase APK1B, chloroplast precursor, putative | 2.2 | ED | 70.90% | 64.2 | |||
ADS-549 | LOC_Os04g18660 | retrotransposon protein, putative, Ty3-gypsy subclass, expressed | 5.26 | - | 9.30% | 69.4 | |||
ADS-574 | LOC_Os03g16610 | laccase precursor protein, putative | 5.21 | EU | 9.80% | 64 | |||
ADS-578 | LOC_Os12g44170 | pentatricopeptide, putative | 2.02 | - | 6.90% | 86 | |||
ADS-687 | LOC_Os09g38710 | HEAT repeat family protein, putative | 3.37 | - | 42.50% | 56.3 | |||
ADS-695 | LOC_Os05g44720 | retrotransposon protein, putative, unclassified, expressed | 3.31 | - | 55.90% | 61.9 | |||
ADS-699 | LOC_Os11g47970 | AAA-type ATPase family protein, putative | 3.98 | ED | 41.40% | 125 | |||
ADS-701 | LOC_Os07g47230 | TKL_IRAK_DUF26-lh.10 - DUF26 kinases have homology to DUF26 containing loci | 16.4 | 12.55 | - | 9.00% | 70.6 | ||
ADS-712 | LOC_Os04g52000 | protein phosphatase 2C, putative | 4.51 | NEU | 18.10% | 74 | |||
ADS-725 | LOC_Os09g39180 | RNA recognition motif containing protein, putative | 2.27 | NED | 23.90% | 76.5 | |||
ADS-74 | LOC_Os12g19381 | ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative | 3.45 | ED | 84.40% | 71 | |||
ADS-742 | LOC_Os08g08060 | vacuolar protein sorting-associated protein 18, putative | 5.05 | - | 5.30% | 80 | |||
ADS-748 | LOC_Os01g54080 | kinesin motor protein-related, putative | 3.11 | ED | 10.90% | 75.9 | |||
ADS-81 | LOC_Os01g69030 | sucrose-phosphate synthase, putative | 2.42 | ED | 8.30% | 90.7 | |||
ADS-87 | LOC_Os10g38580 | glutathione S-transferase, putative | 24.45 | ED | 22.20% | 77 |
denotes the fold change (upregulation) value in column Spot ID compared to the samples in sub-columns C, DS, A and ADS.