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. 2012 Nov 8;7(11):e49331. doi: 10.1371/journal.pone.0049331

Table 4. Differentially expressed protein spots found in 5-azaC and drought treated samples.

Spot I.D MSUv7 ID MSU Gene Product Name Fold change* Cluster Coverage Mascot score
C DS A ADS
C-17 LOC_Os03g38840 retrotransposon, putative, centromere-specific 2.86 - 40.20% 43.9
C-19 LOC_Os04g16830 DNA-directed RNA polymerase subunit beta, putative 9 - 18.70% 53.9
C-212 LOC_Os07g22720 2-oxo acid dehydrogenases acyltransferase domain containing protein 4.2 - 13.20% 84.2
C-220 LOC_Os08g38210 transcription factor BIM2, putative 3.14 EU 10.40% 64
C-241 LOC_Os08g19680 expressed protein 3.3 - 52.90% 45.6
C-260 LOC_Os03g40830 OsSub30 - Putative Subtilisin homologue, expressed 4.8 ED 6.00% 71
C-266 LOC_Os08g39840 lipoxygenase, chloroplast precursor, putative, expressed 3.91 EU 43.90% 48.3
C-615 LOC_Os10g35412 retrotransposon protein, putative, unclassified, expressed 3.03 - 10.70% 58.3
C-99 LOC_Os09g32670 UDP-glucuronate 4-epimerase, putative 4.25 - 21.00% 58.6
DS-107 LOC_Os10g21190 expressed protein 4.9 - 73.00% 60.5
DS-109 LOC_Os11g15570 Ser/Thr protein phosphatase family protein, putative 4.55 NED 11.20% 64
DS-14 LOC_Os03g39010 possible lysine decarboxylase domain containing protein, expressed 34.72 - 25.40% 68.6
DS-187 LOC_Os11g10480 dehydrogenase, putative 5.15 EU 13.70% 62.5
DS-19 LOC_Os03g10510 outer mitochondrial membrane porin, putative 2.41 ED 18.60% 66.7
DS-206 LOC_Os01g07120 AP2 domain containing protein, expressed 3.26 EU 14.90% 51.4
DS-278 LOC_Os03g07700 expressed protein 3.05 NEU 10.40% 65
DS-32 LOC_Os08g41620 ubiquitin carboxyl-terminal hydrolase family protein, expressed 5.37 - 36.50% 72
DS-36 LOC_Os09g25270 hypothetical protein 5.62 - 22.30% 71.5
DS-41 LOC_Os12g37400 MCM7 - Putative minichromosome maintenance MCM complex subunit 7 5.6 NED 41.30% 51
DS-64 LOC_Os12g39830 cyclin, putative 5.05 ED 23.60% 107
DS-81 LOC_Os02g41800 auxin response factor, putative 5.55 - 16.30% 99.3
A-108 LOC_Os08g39150 expressed protein 4.55 EU 14.50% 70
A-133 LOC_Os01g31220 expressed protein 5.91 - 14.20% 77.9
A-164 LOC_Os03g62290 expressed protein 6.36 - 30.90% 66
A-21 LOC_Os01g48874 wax synthase, putative 22.85 ED 18.70% 65
A-23 LOC_Os03g06540 retrotransposon protein, putative, unclassified, expressed 6.33 - 18.40% 62.2
A-234 LOC_Os09g04440 DNA-binding protein, putative 6.33 ED 13.20% 67
A-516 LOC_Os04g38810 formin, putative, expressed 2.04 ED 6.20% 71
A-676 LOC_Os12g10670 AAA-type ATPase family protein, putative 4.8 NED 26.20% 42.8
A-730 LOC_Os12g13780 retrotransposon protein, putative, Ty1-copia subclass, expressed 3.27 - 41.30% 56.3
A-93 LOC_Os11g09070 expressed protein 2.5 - 17.80% 60.6
ADS-144 LOC_Os04g44224 brain acid soluble protein 1, putative 3.93 - 29.40% 65
ADS-188 LOC_Os09g37670 expressed protein 2.21 - 56.00% 53.9
ADS-198 LOC_Os10g33800 lactate/malate dehydrogenase, putative 38.94 ED 28.30% 77.9
ADS-20 LOC_Os01g36600 PPR repeat domain containing protein, putative 6.86 ED 76.20% 47.9
ADS-212 LOC_Os04g40950 glyceraldehyde-3-phosphate dehydrogenase, putative 2.37 - 33.50% 131
ADS-292 LOC_Os07g14270 calreticulin precursor protein, putative 2.25 ED 33.50% 123
ADS-373 LOC_Os11g47760 DnaK family protein, putative 5.26 EU 13.70% 131
ADS-393 LOC_Os01g66730 exosome complex exonuclease RRP40, putative 9.51 - 23.40% 82
ADS-484 LOC_Os02g45950 expressed protein 30.82 - 15.70% 87
ADS-503 LOC_Os10g21268 ribulose bisphosphate carboxylase large chain precursor, putative 7.87 25.21 - 36.60% 179
ADS-546 LOC_Os03g08170 protein kinase APK1B, chloroplast precursor, putative 2.2 ED 70.90% 64.2
ADS-549 LOC_Os04g18660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed 5.26 - 9.30% 69.4
ADS-574 LOC_Os03g16610 laccase precursor protein, putative 5.21 EU 9.80% 64
ADS-578 LOC_Os12g44170 pentatricopeptide, putative 2.02 - 6.90% 86
ADS-687 LOC_Os09g38710 HEAT repeat family protein, putative 3.37 - 42.50% 56.3
ADS-695 LOC_Os05g44720 retrotransposon protein, putative, unclassified, expressed 3.31 - 55.90% 61.9
ADS-699 LOC_Os11g47970 AAA-type ATPase family protein, putative 3.98 ED 41.40% 125
ADS-701 LOC_Os07g47230 TKL_IRAK_DUF26-lh.10 - DUF26 kinases have homology to DUF26 containing loci 16.4 12.55 - 9.00% 70.6
ADS-712 LOC_Os04g52000 protein phosphatase 2C, putative 4.51 NEU 18.10% 74
ADS-725 LOC_Os09g39180 RNA recognition motif containing protein, putative 2.27 NED 23.90% 76.5
ADS-74 LOC_Os12g19381 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative 3.45 ED 84.40% 71
ADS-742 LOC_Os08g08060 vacuolar protein sorting-associated protein 18, putative 5.05 - 5.30% 80
ADS-748 LOC_Os01g54080 kinesin motor protein-related, putative 3.11 ED 10.90% 75.9
ADS-81 LOC_Os01g69030 sucrose-phosphate synthase, putative 2.42 ED 8.30% 90.7
ADS-87 LOC_Os10g38580 glutathione S-transferase, putative 24.45 ED 22.20% 77
*

denotes the fold change (upregulation) value in column Spot ID compared to the samples in sub-columns C, DS, A and ADS.