Table 3. The types and numbers of loops and junctions in () the RNA09 dataset, () the Capriotti's dataset and () the TEST-III dataset, and the number of the correct predictions with the “true” potentials .
RNA09 | Capriotti's | TEST-III | ||||
Types | Total # | Correct # | Total # | Correct # | Total # | Correct # |
Hairpin | 72 | 72 | 37 | 37 | 408 | 395 |
Internal/bulge | 25 | 25 | 14 | 14 | 166 | 165 |
Pseudoknot | 14 | 14 | 5 | 4 | 148 | 147 |
Multibranched | 35 | 35 | 15 | 15 | 329 | 297 |
Junction | 6 | 6 | 1 | 0 | 68 | 66 |
TOTAL | 152 | 152 | 72 | 70 | 1119 | 1070 |