Table 2.
Residues in GPO3 (gp120 from 2I5Y) that have GNM calculated minima. Residues depicted in bold, italic and underlined fonts are conserved among all primates strains, all human strains and moderately conserved in human strains, respectively.
| Residue | Domain | 2nd Structure |
Residue | Domain | 2nd Structure |
|---|---|---|---|---|---|
| T232 | Inner | Loop A | P470 | Outer | ß-24 |
| N234 | Inner | Loop A | G471 | Outer | ß-24 |
| R252 to V255 |
Inner | Loop B | G472 | Outer | |
| S256 to T257 |
Outer | Loop B | G473 | Outer | |
| Q258 | Outer | Loop B | D474 | Outer | |
| L259 to R273 |
Outer | Loop B, ß-9, Loop 10 |
N475 | Inner | α-5 |
| I285 to S291 |
Outer | ß-11 | D477 | α-5 | |
| E370 | Outer | α-3 | N478 | Inner | α-5 |
| I371 | Outer | α-3 | S481 to E482 |
Inner | α-5 |
| S375 to N377 |
Outer | ß-16 | |||
| F383 | Outer | ß-17 | |||
| I499 to L453 |
Outer | ß-22, ß- 23 |