Table III. Biological networks in which 115 differently expressed proteins identified in the nuclear proteome are involved.

No	GO processes	Total nodes	Root nodes	Pathway	p-Value	z-Score	g-Score
1	Response to DNA damage stimulus (46.0%), DNA metabolic process (46.0%), DNA repair (38.0%)	50	25	5	1.53e-52	70.06	76.31
2	DNA metabolic process (48.0%), DNA replication (30.0%), cell cycle (46.0%)	51	18	1	1.53e-34	49.84	51.09
3	Regulation of actin polymerization or depolymerization (11.6%), organelle organization (34.9%), cellular component movement (23.3%)	50	17	0	6.77e-33	49.04	49.04
4	DNA metabolic process (43.8%), cell cycle (45.8%), cell cycle phase (33.3%)	50	16	2	5.37e-30	44.71	47.21
5	Response to stress (52.1%), response to organic substance (41.7%), response to stimulus (68.8%)	50	15	0	1.08e-27	41.89	41.89