Table 1. Probes used, target microorganisms and DNA target regions. [Cyanine dye (CY3); Carboxyfluorescein (FAM)].
Name | Target microorganism | Target region in E.coli* | Length | Sequence | Labeling |
Flavo285 | Flavobacterium spp. | 230 | 17 | 5′-GACCCCTACCCATCRTH-3′ | CY3 |
FlavoP77 | F. psychrophilum | 138 | 22 | 5′-AGTGTGTTGATGCCAACTCACT-3′ | FAM |
FlavoP477 | F. psychrophilum | 532 | 19 | 5′-ACTTATCTGGCCGCCTACG-3′ | FAM |
E.coli, GenBank sequence HM371196.