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. 2012 Jun 21;12:92. doi: 10.1186/1471-2148-12-92

Table 2.

Twelve haplotypes of C. taliensis identified in the rpl32-trnL sequences

Haplotypes Polymorphic sites
1
8
9
1
1
1
1
2
2
2
3
4
5
6
6
7
7
8
1
4
0
0
0
4
6
1
5
5
6
0
8
1
2
7
8
1
      1 2 6 3 6 1 6 4 7 6 7 3 3 9 9
C1
-
T
T
A
*
G
-
C
-
C
A
A
G
A
A
C
-
C
C2
T

G

*

-

-




C


-

C3
-
G


*

-

-







-

C4
-



*

-

-

C





-

C5
-



*

-

-






T
-

C6
-



*

-

-
T






-

C7
-
G

C
*
T
-
T
-


T




-

C8
-



-

-

-







-

C9
-

G

*

A

-



T

C

-
T
C10
-
G

C
*

-

T







-

C11
-
G

C
*

-

-







-

C12 - G * - - #

The number at the top indicates polymorphic sites. Indels are numbered according to the first position in which they occur. Dots represent nucleotide variants identical to the first sequence; - indicates absence; *and # denote two indels (AAATA and AAATATCTA).