Table 5.
PAL haplotype distribution and measures of haplotype diversity in C. taliensis populations
| Haplotypes | S | n | h | π | K | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Populations |
H1 |
H2 |
H3 |
H4 |
H5 |
H6 |
H7 |
H8 |
H9 |
H10 |
H11 |
H12 |
H13 |
H14 |
H15 |
H16 |
H17 |
|
|
|
|
|
| BD |
5 |
1 |
3 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
5 |
4 |
0.71111 |
0.00291 |
1.82222 |
| CNB |
2 |
3 |
|
8 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
6 |
4 |
0.64835 |
0.00249 |
1.56044 |
| CNC |
|
5 |
|
12 |
|
1 |
|
|
|
|
|
|
|
|
|
|
|
5 |
3 |
0.50327 |
0.00139 |
0.86928 |
| CY |
4 |
1 |
1 |
6 |
|
2 |
|
|
|
|
|
|
|
|
|
|
|
6 |
5 |
0.75824 |
0.00393 |
2.46154 |
| FQ |
|
4 |
|
10 |
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
2 |
0.43956 |
0.0007 |
0.43956 |
| GM |
2 |
3 |
3 |
2 |
|
|
|
|
|
|
|
|
|
|
|
|
|
5 |
4 |
0.82222 |
0.00397 |
2.48889 |
| JC |
|
1 |
|
8 |
|
|
7 |
|
|
|
|
|
|
|
|
|
|
2 |
3 |
0.59167 |
0.00104 |
0.65 |
| MD |
2 |
|
2 |
|
|
4 |
|
|
|
|
|
|
|
|
|
|
|
2 |
3 |
0.71429 |
0.00159 |
1 |
| MJ |
3 |
10 |
|
|
|
1 |
|
|
|
|
|
|
|
|
|
|
|
6 |
3 |
0.47253 |
0.00361 |
2.26374 |
| NE |
4 |
1 |
|
|
|
2 |
|
9 |
|
|
|
|
|
|
|
|
|
7 |
4 |
0.64167 |
0.00444 |
2.78333 |
| SJ |
2 |
3 |
1 |
6 |
|
|
|
|
|
|
|
|
|
|
|
|
|
5 |
4 |
0.71212 |
0.00309 |
1.93939 |
| TCB |
|
|
2 |
1 |
|
9 |
|
|
|
|
|
|
|
|
|
|
|
4 |
3 |
0.43939 |
0.00145 |
0.90909 |
| TCD |
|
1 |
3 |
|
|
10 |
|
|
|
|
|
|
|
|
|
|
|
5 |
3 |
0.47253 |
0.00161 |
1.01099 |
| TCH |
2 |
|
|
|
|
7 |
|
|
3 |
|
|
|
|
|
|
|
|
6 |
3 |
0.62121 |
0.00394 |
2.4697 |
| XM |
|
1 |
|
3 |
|
|
|
|
|
2 |
2 |
2 |
|
|
|
|
|
8 |
5 |
0.86667 |
0.00471 |
2.95556 |
| YD |
4 |
5 |
3 |
|
|
1 |
|
|
|
|
|
|
1 |
|
|
|
|
8 |
5 |
0.79121 |
0.00464 |
2.91209 |
| YJ |
1 |
1 |
|
2 |
|
|
|
|
|
|
|
|
|
4 |
3 |
1 |
|
8 |
6 |
0.84848 |
0.00462 |
2.89394 |
| YJM |
|
3 |
1 |
7 |
|
4 |
|
|
|
|
|
|
|
|
|
|
1 |
6 |
5 |
0.75 |
0.00355 |
2.225 |
| YJX |
|
2 |
1 |
|
|
|
|
|
|
1 |
|
|
|
|
|
|
6 |
6 |
4 |
0.64444 |
0.00269 |
1.68889 |
| YX |
1 |
6 |
|
4 |
|
3 |
|
|
|
|
|
|
|
|
|
|
|
6 |
4 |
0.73626 |
0.00375 |
2.35165 |
| ZY |
2 |
5 |
|
5 |
|
|
|
1 |
|
|
|
|
|
|
1 |
|
|
7 |
5 |
0.76923 |
0.0034 |
2.13187 |
| Total | 34 | 56 | 20 | 75 | 1 | 44 | 7 | 10 | 3 | 3 | 2 | 2 | 1 | 4 | 4 | 1 | 7 | 18 | 17 | 0.83639 | 0.00417 | 2.61555 |
n represents the number of haplotypes, S represents the number of segregating sites, h represents haplotype diversity, π represents nucleotide diversity, and K represents average number of differences.