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. 2012 Oct 29;5:48. doi: 10.1186/1755-8794-5-48

Table 1.

Characteristics of the analyzed NB microarray data sets

Study Accesion No. Platform Samples Stages MYCN
Łastowska et al., 2007 [15]
GEO: GSE13136
Affymetrix HG-U133 Plus 2.0 Array
30 neuroblastoma
Stage 1: 4, Stage 2: 2, Stage 3: 1, Stage 4: 20, Stage 4S: 3
MYCN-amplified: 10, MYC-non-amplified: 20
Hiyama et al., 2004 [13]
GEO: GSE16237
 
51 neuroblastoma
Stage 1: 21, Stage 2: 6, Stage 3: 5, Stage 4: 13, Stage 4S: 6
MYCN-amplified: 7, MYC-non-amplified: 44
Janoueix-Lerosey et al., 2008 [14]
GEO: GSE12460
 
52 neuroblastoma, 8 ganglioneuroblastoma, 3 ganglioneuroma, 1 unknown
Stage 1: 10, Stage 2: 10, Stage 3: 7, Stage 4: 16, Stage 4S: 8, unknown: 1
MYCN-amplified: 14, MYC-non-amplified: 32, unknown: 6
Wilzén et al., 2009 [10]
ArrayExpress: E-MEXP-2250
Affymetrix HG-U133A Array
6 neuroblastoma
Stage 1: 1, Stage 2: 1, Stage 3: 4
unknown: 6
De Preter et al., 2006 [12]
ArrayExpress: E-MEXP-669
 
18 neuroblastoma, 3 adrenal cortex, 3 adrenal neuroblast
Stage 1: 4, Stage 3: 3, Stage 4: 10, Stage 4S: 1
MYCN-amplified: 5, MYCN-non-amplified: 13
Albino et al., 2008 [11]
GEO: GSE7529
 
10 neuroblastoma, 3 ganglioneuroblastoma, 6 ganglioneuroma, 9 microdissected tumors
unknown: 10
unknown: 10
Staege et al., 2004 [16]
GEO: GSE1825
 
5 neuroblastoma, 5 Ewing family tumor
Stage 1: 3, Stage 3: 1, Stage 4: 1
unknown: 5
Wang et al., 2006 [9] GEO: GSE1825 Affymetrix HG-U95 Version 2 Array 101 neuroblastoma, 1 fetal brain Stage 1: 28, Stage 3: 23, Stage 4: 50 MYCN-amplified: 20, MYCN-non-amplified: 81